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    CG12093 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 38343, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG12093provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0035372
    Locus tag
    Dmel_CG12093
    See related
    AllianceGenome:FB:FBgn0035372
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG12093
    Summary
    Predicted to be active in cytoplasm. Is expressed in adult head. Orthologous to human TP53I13 (tumor protein p53 inducible protein 13). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG12093 in Genome Data Viewer
    Location:
    62F3-62F3; 3-4 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (2772560..2774007, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (2772560..2774007, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Novel nucleolar protein 2 Neighboring gene Adenosylhomocysteinase like 1 Neighboring gene Autophagy-related 2 Neighboring gene mitochondrial ribosomal protein S35

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome-wide phenotypic RNAi screen in the Drosophila wing: global parameters. López-Varea A, et al. G3 (Bethesda), 2021 Dec 8. PMID 34599819, Free PMC Article
    2. Research gaps and new insights in the evolution of Drosophila seminal fluid proteins. Hurtado J, et al. Insect Mol Biol, 2022 Apr. PMID 34747062
    3. Genome-wide analysis in Drosophila reveals age-specific effects of SNPs on fitness traits. Durham MF, et al. Nat Commun, 2014 Jul 8. PMID 25000897
    4. Transcriptomic analysis of inbreeding depression in cold-sensitive Drosophila melanogaster shows upregulation of the immune response. Vermeulen CJ, et al. J Evol Biol, 2013 Sep. PMID 23944235
    5. Transient junction anisotropies orient annular cell polarization in the Drosophila airway tubes. Hosono C, et al. Nat Cell Biol, 2015 Dec. PMID 26551273

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG12093-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      2772560..2774007 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_139490.2 → NP_647747.1  uncharacterized protein Dmel_CG12093 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_647747.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MR28, Q9VZX8
      Related
      FBpp0072885
      Conserved Domains (1) summary
      pfam11303
      Location:223 → 341
      DUF3105; Protein of unknown function (DUF3105)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8MR28 Q8MR28
    Q9VZX8 Q9VZX8

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