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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001253916.2 → NP_001240845.1 seizure 6-like protein isoform 1 precursor
See identical proteins and their annotated locations for NP_001240845.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes isoform 1.
- Source sequence(s)
-
AC147377, AC151475
- Consensus CDS
-
CCDS57373.1
- UniProtKB/Swiss-Prot
- Q3V651, Q499M3, Q6P1D5, Q6PHN6, Q8C420
- UniProtKB/TrEMBL
-
A0A1D5RMJ7
- Related
- ENSMUSP00000078454.8, ENSMUST00000079491.14
- Conserved Domains (4) summary
-
- cd00033
Location:685 → 741
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- smart00032
Location:746 → 805
- CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
- cd00041
Location:568 → 676
- CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
- pfam00084
Location:507 → 564
- Sushi; Sushi repeat (SCR repeat)
-
NM_001253917.2 → NP_001240846.1 seizure 6-like protein isoform 3 precursor
See identical proteins and their annotated locations for NP_001240846.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks an in-frame exon and has an alternate splice site in the 3' coding region, compared to variant 1. The resulting isoform (3) lacks an internal segment and an internal aa in the C-terminal region, compared to isoform 1.
- Source sequence(s)
-
AC147377, AC151475
- Consensus CDS
-
CCDS80369.1
- UniProtKB/TrEMBL
- A0A0G2JG23, A0A1D5RMJ7
- Related
- ENSMUSP00000143395.2, ENSMUST00000197425.2
- Conserved Domains (4) summary
-
- cd00033
Location:685 → 741
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- smart00032
Location:746 → 805
- CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
- cd00041
Location:568 → 676
- CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
- pfam00084
Location:507 → 564
- Sushi; Sushi repeat (SCR repeat)
-
NM_001403286.1 → NP_001390215.1 seizure 6-like protein isoform 4 precursor
Status: VALIDATED
- Source sequence(s)
-
AC147377, AC151475
- UniProtKB/TrEMBL
- A0A1D5RMI4, A0A1D5RMJ7
- Related
- ENSMUSP00000148791.2, ENSMUST00000212480.2
-
NM_001403287.1 → NP_001390216.1 seizure 6-like protein isoform 5 precursor
Status: VALIDATED
- Source sequence(s)
-
AC147377, AC151475
- UniProtKB/TrEMBL
-
A0A1D5RMJ7
-
NM_001403288.1 → NP_001390217.1 seizure 6-like protein isoform 6 precursor
Status: VALIDATED
- Source sequence(s)
-
AC147377, AC151475
- UniProtKB/TrEMBL
-
A0A1D5RMJ7
-
NM_001403289.1 → NP_001390218.1 seizure 6-like protein isoform 7 precursor
Status: VALIDATED
- Source sequence(s)
-
AC147377, AC151475
- UniProtKB/TrEMBL
-
A0A1D5RMJ7
- Related
- ENSMUSP00000148806.2, ENSMUST00000212758.2
-
NM_019982.4 → NP_064366.2 seizure 6-like protein isoform 2 precursor
See identical proteins and their annotated locations for NP_064366.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) has an alternate splcie site in the 3' coding region, compared to variant 1. The resulting isoform (2) lacks an internal aa, compared to isoform 1.
- Source sequence(s)
-
AC147377, AC151475
- Consensus CDS
-
CCDS51617.1
- UniProtKB/TrEMBL
- A0A0R4J0Y4, A0A1D5RMJ7
- Related
- ENSMUSP00000074847.7, ENSMUST00000075387.11
- Conserved Domains (4) summary
-
- cd00033
Location:685 → 741
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- smart00032
Location:746 → 805
- CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
- cd00041
Location:568 → 676
- CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
- pfam00084
Location:507 → 564
- Sushi; Sushi repeat (SCR repeat)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000071.7 Reference GRCm39 C57BL/6J
- Range
-
112567020..112726401 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006535155.4 → XP_006535218.1 seizure 6-like protein isoform X2
- UniProtKB/TrEMBL
-
A0A1D5RMJ7
- Conserved Domains (5) summary
-
- cd00033
Location:685 → 741
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- smart00032
Location:333 → 388
- CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
- PHA03247
Location:2 → 186
- PHA03247; large tegument protein UL36; Provisional
- cd00041
Location:568 → 676
- CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
- pfam00084
Location:507 → 564
- Sushi; Sushi repeat (SCR repeat)
-
XM_006535156.4 → XP_006535219.1 seizure 6-like protein isoform X3
- UniProtKB/TrEMBL
-
A0A1D5RMJ7
- Conserved Domains (6) summary
-
- cd00033
Location:685 → 741
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- PHA02639
Location:685 → 809
- PHA02639; EEV host range protein; Provisional
- smart00032
Location:333 → 388
- CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
- PHA03247
Location:2 → 186
- PHA03247; large tegument protein UL36; Provisional
- cd00041
Location:568 → 676
- CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
- pfam00084
Location:507 → 564
- Sushi; Sushi repeat (SCR repeat)
-
XM_036165359.1 → XP_036021252.1 seizure 6-like protein isoform X7
- Conserved Domains (4) summary
-
- smart00032
Location:333 → 388
- CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
- PHA03247
Location:2 → 186
- PHA03247; large tegument protein UL36; Provisional
- cd00041
Location:392 → 501
- CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
- pfam00084
Location:507 → 564
- Sushi; Sushi repeat (SCR repeat)