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    Zfp512 zinc finger protein 512 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 313906, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Zfp512provided by RGD
    Official Full Name
    zinc finger protein 512provided by RGD
    Primary source
    RGD:1561526
    See related
    EnsemblRapid:ENSRNOG00000039815 AllianceGenome:RGD:1561526
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Znf512; RGD1561526
    Summary
    Predicted to enable DNA binding activity and zinc ion binding activity. Predicted to be located in nucleus. Orthologous to human ZNF512 (zinc finger protein 512). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Brain (RPKM 105.1), Lung (RPKM 85.5) and 9 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Zfp512 in Genome Data Viewer
    Location:
    6q14
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 6 NC_086024.1 (30696889..30727895, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 6 NC_051341.1 (24976903..25007913, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 6 NC_005105.4 (26284749..26314841, complement)

    Chromosome 6 - NC_086024.1Genomic Context describing neighboring genes Neighboring gene GPN-loop GTPase 1 Neighboring gene coiled-coil domain containing 121 Neighboring gene SPATA31 subfamily H member 1 Neighboring gene glucokinase regulator

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    zinc finger protein 512

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001430713.1 → NP_001417642.1  zinc finger protein 512 isoform 1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000006
      UniProtKB/TrEMBL
      A0A8I5YC41, D3ZIF0

    2. NM_001430714.1 → NP_001417643.1  zinc finger protein 512 isoform 2

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000006
      UniProtKB/TrEMBL
      A0A8I5YC41

    3. NM_001430715.1 → NP_001417644.1  zinc finger protein 512 isoform 3

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000006
      UniProtKB/TrEMBL
      A0A8I6A0X6, A0A8I6AG24

    4. NM_001430716.1 → NP_001417645.1  zinc finger protein 512 isoform 4

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000006
      UniProtKB/TrEMBL
      A6HA54

    5. NM_001430717.1 → NP_001417646.1  zinc finger protein 512 isoform 4

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000006
      UniProtKB/TrEMBL
      A6HA54

    6. NM_001430718.1 → NP_001417647.1  zinc finger protein 512 isoform 4

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000006
      UniProtKB/TrEMBL
      A6HA54

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086024.1 Reference GRCr8

      Range
      30696889..30727895 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006239836.5 → XP_006239898.2  zinc finger protein 512 isoform X2

      Conserved Domains (1) summary
      COG5189
      Location:407 → 463
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

    2. XM_006239834.5 → XP_006239896.1  zinc finger protein 512 isoform X1

      Related
      ENSRNOP00000085784.2, ENSRNOT00000096179.2
      Conserved Domains (1) summary
      COG5189
      Location:409 → 465
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

    3. XM_039113088.2 → XP_038969016.1  zinc finger protein 512 isoform X3

      Conserved Domains (1) summary
      COG5189
      Location:255 → 311
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    Nucleotide Protein Strain
    Heading Accession and Version

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