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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001289023.3 → NP_001275952.2 leukocyte-associated immunoglobulin-like receptor 1 isoform c precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (c) lacks an in-frame exon and uses an alternate in-frame splice site in the central coding region, compared to variant 1. The encoded isoform (c) is shorter, compared to isoform a.
- Source sequence(s)
-
AC245884, AF013249, AK315419, DC389365
- Consensus CDS
-
CCDS74448.1
- UniProtKB/TrEMBL
- A0A0G2JP18, A0A0G2JQ50
- Related
- ENSP00000418998.1, ENST00000474878.5
- Conserved Domains (1) summary
-
- cl11960
Location:26 → 119
- Ig; Immunoglobulin domain
-
NM_001289025.3 → NP_001275954.2 leukocyte-associated immunoglobulin-like receptor 1 isoform e precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (e) uses an alternate in-frame splice site in the central coding region. The encoded isoform (e) is shorter, compared to isoform a.
- Source sequence(s)
-
AC245884, AF013249, AK315419, DC389365
- Consensus CDS
-
CCDS74449.1
- UniProtKB/TrEMBL
- A0A0G2JP18, D3YTC8
- Related
- ENSP00000391003.2, ENST00000434277.6
- Conserved Domains (1) summary
-
- cl11960
Location:26 → 119
- Ig; Immunoglobulin domain
-
NM_001289026.3 → NP_001275955.2 leukocyte-associated immunoglobulin-like receptor 1 isoform f
Status: REVIEWED
- Description
- Transcript Variant: This variant (f) differs in the 5' UTR, lacks part of the 5' coding region, and uses an alternate start codon, compared to variant a. The encoded isoform (f) has a shorter and distinct N-terminus, compared to isoform a.
- Source sequence(s)
-
AC245884, AK303261, DA941174, DC389365
- UniProtKB/TrEMBL
-
A0A0G2JNU6
- Conserved Domains (1) summary
-
- cl11960
Location:20 → 113
- Ig; Immunoglobulin domain
-
NM_001289027.3 → NP_001275956.2 leukocyte-associated immunoglobulin-like receptor 1 isoform g
Status: REVIEWED
- Description
- Transcript Variant: This variant (g) differs in the 5' UTR, lacks part of the 5' coding region, and uses an alternate start codon, compared to variant a. The encoded isoform (g) has a shorter and distinct N-terminus, compared to isoform a.
- Source sequence(s)
-
AC245884, AK303261, DA941174, DC390481
- Consensus CDS
-
CCDS74450.1
- UniProtKB/TrEMBL
- A0A0G2JNU6, A8MZ84
- Related
- ENSP00000375623.3, ENST00000391743.7
- Conserved Domains (1) summary
-
- cl11960
Location:9 → 102
- Ig; Immunoglobulin domain
-
NM_002287.6 → NP_002278.2 leukocyte-associated immunoglobulin-like receptor 1 isoform a precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (a) encodes the longest isoform (a).
- Source sequence(s)
-
AC245884, AF013249, AK315419, DC389365
- Consensus CDS
-
CCDS12891.1
- UniProtKB/Swiss-Prot
-
Q6GTX8
- UniProtKB/TrEMBL
- A0A0G2JLV7, A0A0G2JP18
- Related
- ENSP00000375622.2, ENST00000391742.7
- Conserved Domains (1) summary
-
- cl11960
Location:27 → 120
- Ig; Immunoglobulin domain
-
NM_021706.5 → NP_068352.2 leukocyte-associated immunoglobulin-like receptor 1 isoform b precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (b) lacks an in-frame exon in the central coding region, compared to variant 1. The encoded isoform (b) is shorter, compared to isoform a.
- Source sequence(s)
-
AC245884, AF013249, AK315419, DC389365
- Consensus CDS
-
CCDS12892.1
- UniProtKB/TrEMBL
-
A0A0G2JLV7
- Related
- ENSP00000301193.4, ENST00000348231.8
- Conserved Domains (1) summary
-
- cl11960
Location:27 → 120
- Ig; Immunoglobulin domain
RNA
-
NR_110279.3 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (h) uses an alternate splice site at an internal exon, compared to variant a. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant a, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC245884, AF013249, AK315419, DC389365
-
NR_110280.3 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (i) uses three alternate splice sites at internal exons, compared to variant a. This variant is represented as non-coding because the predicted protein does not meet RefSeq quality criteria.
- Source sequence(s)
-
AC245884, AF013249, BM918573, DB134342, DC391314
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000019.10 Reference GRCh38.p14 Primary Assembly
- Range
-
54351384..54376088 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047438811.1 → XP_047294767.1 leukocyte-associated immunoglobulin-like receptor 1 isoform X1
- UniProtKB/TrEMBL
-
A0A0G2JNU6
-
XM_047438812.1 → XP_047294768.1 leukocyte-associated immunoglobulin-like receptor 1 isoform X2
- UniProtKB/TrEMBL
- A0A0G2JNU6, A8MZ84
-
XM_047438810.1 → XP_047294766.1 leukocyte-associated immunoglobulin-like receptor 1 isoform X1
- UniProtKB/TrEMBL
-
A0A0G2JNU6
-
XM_017026803.3 → XP_016882292.1 leukocyte-associated immunoglobulin-like receptor 1 isoform X3
Reference GRCh38.p14 ALT_REF_LOCI_2
Genomic
-
NW_003571055.2 Reference GRCh38.p14 ALT_REF_LOCI_2
- Range
-
332788..356820 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054330173.1 → XP_054186148.1 leukocyte-associated immunoglobulin-like receptor 1 isoform X2
- UniProtKB/TrEMBL
- A0A0G2JNK8, A0A0G2JNU6
-
XM_054330172.1 → XP_054186147.1 leukocyte-associated immunoglobulin-like receptor 1 isoform X1
- UniProtKB/TrEMBL
-
A0A0G2JNU6
-
XM_054330171.1 → XP_054186146.1 leukocyte-associated immunoglobulin-like receptor 1 isoform X4
- UniProtKB/TrEMBL
-
A0A0G2JNU6
-
XM_054330176.1 → XP_054186151.1 leukocyte-associated immunoglobulin-like receptor 1 isoform X6
- UniProtKB/TrEMBL
-
A0A0G2JNU6
-
XM_054330175.1 → XP_054186150.1 leukocyte-associated immunoglobulin-like receptor 1 isoform X5
- UniProtKB/TrEMBL
-
A0A0G2JNU6
-
XM_054330174.1 → XP_054186149.1 leukocyte-associated immunoglobulin-like receptor 1 isoform X3
Reference GRCh38.p14 ALT_REF_LOCI_7
Genomic
-
NW_003571060.1 Reference GRCh38.p14 ALT_REF_LOCI_7
- Range
-
233996..275209 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Reference GRCh38.p14 ALT_REF_LOCI_8
Genomic
-
NW_003571061.2 Reference GRCh38.p14 ALT_REF_LOCI_8
- Range
-
333344..357374 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054333549.1 → XP_054189524.1 leukocyte-associated immunoglobulin-like receptor 1 isoform X8
- UniProtKB/TrEMBL
-
A0A0G2JNU6
-
XM_054333548.1 → XP_054189523.1 leukocyte-associated immunoglobulin-like receptor 1 isoform X2
- UniProtKB/TrEMBL
- A0A0G2JMI0, A0A0G2JNU6
-
XM_054333547.1 → XP_054189522.1 leukocyte-associated immunoglobulin-like receptor 1 isoform X1
- UniProtKB/TrEMBL
- A0A0G2JNU6, A0A140T8W3
-
XM_054333546.1 → XP_054189521.1 leukocyte-associated immunoglobulin-like receptor 1 isoform X7
- UniProtKB/TrEMBL
-
A0A0G2JNU6
-
XM_054333552.1 → XP_054189527.1 leukocyte-associated immunoglobulin-like receptor 1 isoform X11
- UniProtKB/TrEMBL
-
A0A0G2JNU6
-
XM_054333551.1 → XP_054189526.1 leukocyte-associated immunoglobulin-like receptor 1 isoform X10
- UniProtKB/TrEMBL
-
A0A0G2JNU6
-
XM_054333550.1 → XP_054189525.1 leukocyte-associated immunoglobulin-like receptor 1 isoform X9
- UniProtKB/TrEMBL
-
F8WC07
Reference GRCh38.p14 ALT_REF_LOCI_9
Genomic
-
NT_187693.1 Reference GRCh38.p14 ALT_REF_LOCI_9
- Range
-
334105..358134 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054333650.1 → XP_054189625.1 leukocyte-associated immunoglobulin-like receptor 1 isoform X2
- UniProtKB/TrEMBL
- A0A0G2JMI0, A0A0G2JNU6
-
XM_054333649.1 → XP_054189624.1 leukocyte-associated immunoglobulin-like receptor 1 isoform X1
- UniProtKB/TrEMBL
- A0A0G2JNU6, A0A140T8W3
-
XM_054333648.1 → XP_054189623.1 leukocyte-associated immunoglobulin-like receptor 1 isoform X12
- UniProtKB/TrEMBL
-
A0A0G2JNU6
-
XM_054333652.1 → XP_054189627.1 leukocyte-associated immunoglobulin-like receptor 1 isoform X13
- UniProtKB/TrEMBL
-
A0A0G2JNU6
-
XM_054333651.1 → XP_054189626.1 leukocyte-associated immunoglobulin-like receptor 1 isoform X3
Alternate T2T-CHM13v2.0
Genomic
-
NC_060943.1 Alternate T2T-CHM13v2.0
- Range
-
57442896..57466925 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054320984.1 → XP_054176959.1 leukocyte-associated immunoglobulin-like receptor 1 isoform X16
- UniProtKB/TrEMBL
-
A0A0G2JNU6
-
XM_054320982.1 → XP_054176957.1 leukocyte-associated immunoglobulin-like receptor 1 isoform X2
- UniProtKB/TrEMBL
- A0A0G2JMI0, A0A0G2JNU6
-
XM_054320981.1 → XP_054176956.1 leukocyte-associated immunoglobulin-like receptor 1 isoform X1
- UniProtKB/TrEMBL
- A0A0G2JNU6, A0A140T8W3
-
XM_054320983.1 → XP_054176958.1 leukocyte-associated immunoglobulin-like receptor 1 isoform X15
- UniProtKB/TrEMBL
-
A0A0G2JNU6
-
XM_054320980.1 → XP_054176955.1 leukocyte-associated immunoglobulin-like receptor 1 isoform X14
- UniProtKB/TrEMBL
-
A0A0G2JNU6
-
XM_054320987.1 → XP_054176962.1 leukocyte-associated immunoglobulin-like receptor 1 isoform X18
- UniProtKB/TrEMBL
-
A0A0G2JNU6
-
XM_054320986.1 → XP_054176961.1 leukocyte-associated immunoglobulin-like receptor 1 isoform X17
- UniProtKB/TrEMBL
-
A0A0G2JNU6
-
XM_054320985.1 → XP_054176960.1 leukocyte-associated immunoglobulin-like receptor 1 isoform X3
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_021708.1: Suppressed sequence
- Description
- NM_021708.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.