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    NIF3 uncharacterized protein [ Saccharomyces cerevisiae S288C ]

    Gene ID: 852651, updated on 9-Dec-2024

    Summary

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    Official Symbol
    NIF3
    Official Full Name
    uncharacterized protein
    Primary source
    SGD:S000003189
    Locus tag
    YGL221C
    See related
    AllianceGenome:SGD:S000003189; FungiDB:YGL221C; VEuPathDB:YGL221C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Located in mitochondrion. Orthologous to human NIF3L1 (NGG1 interacting factor 3 like 1). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See NIF3 in Genome Data Viewer
    Location:
    chromosome: VII
    Exon count:
    1
    Sequence:
    Chromosome: VII; NC_001139.9 (81426..82292, complement)

    Chromosome VII - NC_001139.9Genomic Context describing neighboring genes Neighboring gene Golgi transport complex subunit COG1 Neighboring gene Edc1p Neighboring gene Bol2p Neighboring gene ERMES complex subunit MDM34

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001139.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Alpha-complementation as a probe for dual localization of mitochondrial proteins. Karniely S, et al. Exp Cell Res, 2006 Nov 15. PMID 17034789
    2. Disorder targets misorder in nuclear quality control degradation: a disordered ubiquitin ligase directly recognizes its misfolded substrates. Rosenbaum JC, et al. Mol Cell, 2011 Jan 7. PMID 21211726, Free PMC Article
    3. Transcriptional activation by yeast PDR1p is inhibited by its association with NGG1p/ADA3p. Martens JA, et al. J Biol Chem, 1996 Jul 5. PMID 8663102
    4. Ribosome-Associated Mba1 Escorts Cox2 from Insertion Machinery to Maturing Assembly Intermediates. Lorenzi I, et al. Mol Cell Biol, 2016 Nov 15. PMID 27550809, Free PMC Article
    5. A proteomic screen of Ty1 integrase partners identifies the protein kinase CK2 as a regulator of Ty1 retrotransposition. Barkova A, et al. Mob DNA, 2022 Nov 18. PMID 36401307, Free PMC Article

    See all (29) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm HDA PubMed 
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in mitochondrion HDA PubMed 
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_011294.1
    • hypothetical protein; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001139.9 Reference assembly

      Range
      81426..82292 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001181086.1 → NP_011294.1  TPA: uncharacterized protein YGL221C [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_011294.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VVB4, E9P932, P53081
      UniProtKB/TrEMBL
      A6ZTX0, B3LHR3, B5VIB7, C7GWX9, C8Z834, G2WDP0, N1P3X1
      Conserved Domains (1) summary
      TIGR00486
      Location:8 → 284
      YbgI_SA1388; dinuclear metal center protein, YbgI/SA1388 family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P53081.1

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