U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CG42544 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 8674002, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CG42544provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0260713
    Locus tag
    Dmel_CG42544
    See related
    AllianceGenome:FB:FBgn0260713
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG42544; FBgn0260713; HCD12266
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CG42544 in Genome Data Viewer
    Location:
    84D3-84D3; 3-48 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (7304592..7304954)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (3130314..3130676)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene rotund Neighboring gene long non-coding RNA:CR44333 Neighboring gene Rac GTPase activating protein at 84C Neighboring gene long non-coding RNA:CR44334 Neighboring gene long non-coding RNA:CR46130

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Heterologous expression of naturally evolved putative de novo proteins with chaperones. Eicholt LA, et al. Protein Sci, 2022 Aug. PMID 35900020, Free PMC Article
    2. A Continuum of Evolving De Novo Genes Drives Protein-Coding Novelty in Drosophila. Heames B, et al. J Mol Evol, 2020 May. PMID 32253450, Free PMC Article
    3. The Release 6 reference sequence of the Drosophila melanogaster genome. Hoskins RA, et al. Genome Res, 2015 Mar. PMID 25589440, Free PMC Article
    4. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867, Free PMC Article
    5. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856, Free PMC Article

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    Names
    CG42544-PA

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      7304592..7304954
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001170068.1 → NP_001163539.1  uncharacterized protein Dmel_CG42544 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001163539.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      E1JJ79, Q6IKJ9
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    E1JJ79 E1JJ79

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools