U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    BomBc1 Bomanin Bicipital 1 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37099, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    BomBc1provided by FlyBase
    Official Full Name
    Bomanin Bicipital 1provided by FlyBase
    Primary source
    FLYBASE:FBgn0034328
    Locus tag
    Dmel_CG15066
    See related
    AllianceGenome:FB:FBgn0034328
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:RH67033; Bom23; CG15066; DIM 23; DIM-23; Dmel\CG15066; IM23
    Summary
    Involved in antibacterial humoral response; defense response to Gram-positive bacterium; and response to mycotoxin. Located in extracellular region. Is expressed in photoreceptor neurons. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See BomBc1 in Genome Data Viewer
    Location:
    55C4-55C4; 2-85 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (18382704..18383235, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (14270209..14270740, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR42736 Neighboring gene Bomanin Tailed 1 Neighboring gene Bomanin Short 1 Neighboring gene Bomanin Short 4 Neighboring gene Bomanin Bicipital 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The genetic basis of variation in immune defense against Lysinibacillus fusiformis infection in Drosophila melanogaster. Smith BR, et al. PLoS Pathog, 2023 Aug. PMID 37549163, Free PMC Article
    2. The Putzig-NURF nucleosome remodeling complex is required for ecdysone receptor signaling and innate immunity in Drosophila melanogaster. Kugler SJ, et al. Genetics, 2011 May. PMID 21385730, Free PMC Article
    3. Trans-regulatory changes underpin the evolution of the Drosophila immune response. Ding SD, et al. PLoS Genet, 2022 Nov. PMID 36342922, Free PMC Article
    4. Salty dog, an SLC5 symporter, modulates Drosophila response to salt stress. Stergiopoulos K, et al. Physiol Genomics, 2009 Mar 3. PMID 19018044, Free PMC Article
    5. The Genetic Basis of Natural Variation in Drosophila melanogaster Immune Defense against Enterococcus faecalis. Chapman JR, et al. Genes (Basel), 2020 Feb 22. PMID 32098395, Free PMC Article

    See all (93) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in antibacterial humoral response IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in defense response IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in defense response to Gram-positive bacterium IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to bacterium HEP PubMed 
    involved_in response to mycotoxin IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    bomanin bicipital 1
    Names
    BomBc1-PA
    CG15066-PA
    Immune-induced peptide 23 precursor
    bomanin 23
    bomanin Bc1
    immune induced molecule 23

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      18382704..18383235 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_137474.5 → NP_611318.2  bomanin bicipital 1 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_611318.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8SY64, Q9V8F5
      UniProtKB/TrEMBL
      A0A1B2AJ76, A4VA55
      Related
      FBpp0085908
      Conserved Domains (1) summary
      pfam08194
      Location:1 → 33
      DIM; DIM protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9V8F5.2 Q9V8F5

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools