U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CG43271 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 12798001, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CG43271provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0262960
    Locus tag
    Dmel_CG43271
    See related
    AllianceGenome:FB:FBgn0262960
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG43271; lincRNA.174
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CG43271 in Genome Data Viewer
    Location:
    36E2-36E2; 2-53 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (17914365..17915023, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (17914365..17915023, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45332 Neighboring gene long non-coding RNA:CR45333 Neighboring gene long non-coding RNA:CR43274 Neighboring gene long non-coding RNA:CR44399

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article
    2. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
    3. The Release 6 reference sequence of the Drosophila melanogaster genome. Hoskins RA, et al. Genome Res, 2015 Mar. PMID 25589440, Free PMC Article
    4. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867, Free PMC Article
    5. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856, Free PMC Article

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    Names
    CG43271-PA
    CG43271-PB
    CG43271-PC
    CG43271-PD

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      17914365..17915023 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001299091.1 → NP_001286020.1  uncharacterized protein Dmel_CG43271, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286020.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9NF77

    2. NM_001259141.2 → NP_001246070.1  uncharacterized protein Dmel_CG43271, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246070.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9NF77

    3. NM_001259142.2 → NP_001246071.1  uncharacterized protein Dmel_CG43271, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246071.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9NF77

    4. NM_001259143.2 → NP_001246072.1  uncharacterized protein Dmel_CG43271, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246072.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9NF77
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9NF77 M9NF77

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials