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    NimB2 Nimrod B2 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 260645, updated on 9-Dec-2024

    Summary

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    Official Symbol
    NimB2provided by FlyBase
    Official Full Name
    Nimrod B2provided by FlyBase
    Primary source
    FLYBASE:FBgn0028543
    Locus tag
    Dmel_CG31839
    See related
    AllianceGenome:FB:FBgn0028543
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BG:DS00180.7; CG16882; CG31839; CT37470; Dmel\CG31839; DS00180.7; nimB2
    Summary
    Involved in mesoderm development. Predicted to be located in extracellular region. Is expressed in adult pars intercerebralis. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See NimB2 in Genome Data Viewer
    Location:
    34E5-34E5; 2-50 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (13965012..13967018, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (13965012..13967018, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Ance-3 Neighboring gene Vajk3 Neighboring gene Nimrod A Neighboring gene Nimrod B1 Neighboring gene Nimrod B3 Neighboring gene Nimrod B4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and repeats in the Nimrod superfamily. Somogyi K, et al. Mol Biol Evol, 2008 Nov. PMID 18703524
    2. A secreted factor NimrodB4 promotes the elimination of apoptotic corpses by phagocytes in Drosophila. Petrignani B, et al. EMBO Rep, 2021 Sep 6. PMID 34370384, Free PMC Article
    3. Nimrod, a putative phagocytosis receptor with EGF repeats in Drosophila plasmatocytes. Kurucz E, et al. Curr Biol, 2007 Apr 3. PMID 17363253
    4. The adipokine NimrodB5 regulates peripheral hematopoiesis in Drosophila. Ramond E, et al. FEBS J, 2020 Aug. PMID 32009293
    5. A conserved gene cluster as a putative functional unit in insect innate immunity. Somogyi K, et al. FEBS Lett, 2010 Nov 5. PMID 20951134

    See all (45) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in immune response IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in mesoderm development IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in phagocytosis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    nimrod B2
    Names
    CG31839-PA
    NimB2-PA
    nimrodB2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      13965012..13967018 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_165075.3 → NP_723857.1  nimrod B2 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_723857.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7KTA1
      Related
      FBpp0080191
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q7KTA1 Q7KTA1

    Gene LinkOut

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