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    Baldspot baldspot [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 39860, updated on 9-Dec-2024

    Summary

    Official Symbol
    Baldspotprovided by FlyBase
    Official Full Name
    baldspotprovided by FlyBase
    Primary source
    FLYBASE:FBgn0260960
    Locus tag
    Dmel_CG3971
    See related
    AllianceGenome:FB:FBgn0260960
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    baldspot; blp; CG 3971; CG3971; Dmel\CG3971; Elovl6; ELOVL6; l(3)01895; l(3)02281; l(3)04106; l(3)neo21; l(3)neo22; NEST:bs18f10; NEST:bs18g10; noa
    Summary
    Enables fatty acid elongase activity. Involved in fatty acid elongation, saturated fatty acid. Located in mitochondrial outer membrane. Is expressed in several structures, including ganglia; gonad; gut section; imaginal disc; and presumptive embryonic/larval system. Orthologous to several human genes including ELOVL6 (ELOVL fatty acid elongase 6). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See Baldspot in Genome Data Viewer
    Location:
    73B4-73B5; 3-44 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (16648442..16661615, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (16641542..16654715, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Mo25 Neighboring gene Abl tyrosine kinase Neighboring gene small nuclear RNA U12 Neighboring gene antisense RNA:CR46033 Neighboring gene G protein alpha subunit f Neighboring gene long non-coding RNA:CR45241

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables fatty acid elongase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables fatty acid elongase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables fatty acid elongase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables fatty acid elongase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in fatty acid elongation ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    involved_in fatty acid elongation, monounsaturated fatty acid IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in fatty acid elongation, polyunsaturated fatty acid IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in fatty acid elongation, saturated fatty acid IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in fatty acid elongation, saturated fatty acid IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in long-chain fatty acid biosynthetic process ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    involved_in sphingolipid biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in very long-chain fatty acid biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in endoplasmic reticulum membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum membrane ISM
    Inferred from Sequence Model
    more info
    PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrial outer membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    baldspot
    Names
    Baldspot-PA
    Baldspot-PB
    CG3971-PA
    CG3971-PB
    neighbor of abl
    NP_648909.1
    NP_730187.2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      16648442..16661615 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_140652.4NP_648909.1  baldspot, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_648909.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q95T92, Q9NB55, Q9VV87
      Related
      FBpp0075114
      Conserved Domains (1) summary
      pfam01151
      Location:30271
      ELO; GNS1/SUR4 family
    2. NM_168678.3NP_730187.2  baldspot, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_730187.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q95T92, Q9NB55, Q9VV87
      Related
      FBpp0075115
      Conserved Domains (1) summary
      pfam01151
      Location:30271
      ELO; GNS1/SUR4 family