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    uncharacterized protein [ Saccharomyces cerevisiae S288C ]

    Gene ID: 854641, updated on 9-Dec-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    SGD:S000001427
    Locus tag
    YIL165C
    See related
    AllianceGenome:SGD:S000001427; FungiDB:YIL165C; VEuPathDB:YIL165C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Predicted to enable catalytic activity. Involved in autophagy of mitochondrion and macroautophagy. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    Location:
    chromosome: IX
    Exon count:
    1
    Sequence:
    Chromosome: IX; NC_001141.2 (33718..34077, complement)

    Chromosome IX - NC_001141.2Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Soa1p Neighboring gene Nit1p Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001141.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A small reservoir of disabled ORFs in the yeast genome and its implications for the dynamics of proteome evolution. Harrison P, et al. J Mol Biol, 2002 Feb 22. PMID 11866506
    2. Effect of 21 different nitrogen sources on global gene expression in the yeast Saccharomyces cerevisiae. Godard P, et al. Mol Cell Biol, 2007 Apr. PMID 17308034, Free PMC Article
    3. Sequencing and comparison of yeast species to identify genes and regulatory elements. Kellis M, et al. Nature, 2003 May 15. PMID 12748633
    4. Tup1-Ssn6 and Swi-Snf remodelling activities influence long-range chromatin organization upstream of the yeast SUC2 gene. Fleming AB, et al. Nucleic Acids Res, 2007. PMID 17704134, Free PMC Article
    5. A genomic screen for yeast mutants defective in selective mitochondria autophagy. Kanki T, et al. Mol Biol Cell, 2009 Nov. PMID 19793921, Free PMC Article

    See all (21) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables catalytic activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in autophagy of mitochondrion IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in macroautophagy IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_012101.1
    • hypothetical protein; mutant exhibits mitophagy defects; in closely related species and other S. cerevisiae strain backgrounds YIL165C and adjacent ORF, YIL164C, likely constitute a single ORF encoding a nitrilase gene

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001141.2 Reference assembly

      Range
      33718..34077 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001179513.1 → NP_012101.1  TPA: uncharacterized protein YIL165C [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_012101.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VVC2, P40446, Q05730
      UniProtKB/TrEMBL
      C8ZAU9, G2WFY6
      Conserved Domains (1) summary
      cl11424
      Location:1 → 110
      nitrilase; Nitrilase superfamily, including nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P40446.1

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