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    CG6709 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 39166, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG6709provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0036056
    Locus tag
    Dmel_CG6709
    See related
    AllianceGenome:FB:FBgn0036056
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG6709
    Orthologs
    all
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    Genomic context

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    See CG6709 in Genome Data Viewer
    Location:
    67D1-67D1; 3-32 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (9893188..9894743, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (9886288..9887843, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene TBP-associated factor 2 Neighboring gene antisense RNA:CR45875 Neighboring gene Calpain-B Neighboring gene Hezron Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene nudE

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Truncated TPPP - An Endopterygota-specific protein. Orosz F. Heliyon, 2021 May. PMID 34136696, Free PMC Article
    2. Transcriptomic analysis of inbreeding depression in cold-sensitive Drosophila melanogaster shows upregulation of the immune response. Vermeulen CJ, et al. J Evol Biol, 2013 Sep. PMID 23944235
    3. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article
    4. Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes. López-Varea A, et al. G3 (Bethesda), 2021 Dec 8. PMID 34599810, Free PMC Article
    5. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG6709-PA
    CG6709-PB
    truncated TPPP

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      9893188..9894743 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001104097.2 → NP_001097567.1  uncharacterized protein Dmel_CG6709, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001097567.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VT66
      Conserved Domains (1) summary
      pfam05517
      Location:41 → 107
      p25-alpha; p25-alpha

    2. NM_140113.3 → NP_648370.1  uncharacterized protein Dmel_CG6709, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_648370.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VT66
      Related
      FBpp0076089
      Conserved Domains (1) summary
      pfam05517
      Location:41 → 107
      p25-alpha; p25-alpha
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VT66 Q9VT66

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