These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

1. NM_001081050.3 → NP_001074519.2  partitioning defective 3 homolog B

   See identical proteins and their annotated locations for NP_001074519.2

   Status: VALIDATED

   Source sequence(s)

   AC101661, AL645544, AL645727, AL662815, AL662920

   Consensus CDS

   CCDS48276.1

   UniProtKB/Swiss-Prot

   Q5SV53, Q9CSB4

   UniProtKB/TrEMBL

   Q5SV55

   Related

   ENSMUSP00000074837.4, ENSMUST00000075374.10

   Conserved Domains (3) summary

   smart00228
   Location:380 → 469

   PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

   cd00992
   Location:501 → 589

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   pfam12053
   Location:1 → 143

   DUF3534; Domain of unknown function (DUF3534)

The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference GRCm39 C57BL/6J

Genomic

1. NC_000067.7 Reference GRCm39 C57BL/6J

   Range

   61677825..62681443

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_036153731.1 → XP_036009624.1  partitioning defective 3 homolog B isoform X4

   Conserved Domains (3) summary

   smart00228
   Location:415 → 504

   PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

   cd00992
   Location:536 → 624

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   pfam12053
   Location:2 → 74

   DUF3534; N-terminal of Par3 and HAL proteins

2. XM_011238602.4 → XP_011236904.1  partitioning defective 3 homolog B isoform X3

   Conserved Domains (3) summary

   smart00228
   Location:415 → 504

   PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

   cd00992
   Location:536 → 624

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   pfam12053
   Location:2 → 74

   DUF3534; N-terminal of Par3 and HAL proteins

3. XM_006496298.4 → XP_006496361.1  partitioning defective 3 homolog B isoform X1

   UniProtKB/TrEMBL

   Q5SV55

   Conserved Domains (3) summary

   smart00228
   Location:415 → 504

   PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

   cd00992
   Location:536 → 624

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   pfam12053
   Location:2 → 74

   DUF3534; N-terminal of Par3 and HAL proteins

4. XM_006496299.5 → XP_006496362.1  partitioning defective 3 homolog B isoform X2

   UniProtKB/TrEMBL

   Q5SV55

   Conserved Domains (2) summary

   smart00228
   Location:201 → 290

   PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

   cd00992
   Location:322 → 410

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...