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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_021190.4 RefSeqGene
- Range
-
294594..310394
- Download
- GenBank, FASTA, Sequence Viewer (Graphics), LRG_840
mRNA and Protein(s)
-
NM_001170961.2 → NP_001164432.1 immunoglobulin superfamily member 1 isoform 3 precursor
See identical proteins and their annotated locations for NP_001164432.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) represents the longest transcript and encodes the longest protein (isoform 3).
- Source sequence(s)
-
AL590806
- Consensus CDS
-
CCDS55491.1
- UniProtKB/TrEMBL
-
A0A494C0K8
- Related
- ENSP00000359940.3, ENST00000370903.8
- Conserved Domains (2) summary
-
- smart00410
Location:793 → 873
- IG_like; Immunoglobulin like
- cl11960
Location:1166 → 1252
- Ig; Immunoglobulin domain
-
NM_001170962.2 → NP_001164433.1 immunoglobulin superfamily member 1 isoform 4 precursor
See identical proteins and their annotated locations for NP_001164433.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks an alternate in-frame exon in the 5' coding region and uses an alternate in-frame splice site in a 3' exon compared to variant 3. The resulting protein (isoform 4) is shorter compared to isoform 3.
- Source sequence(s)
-
AL590806
- Consensus CDS
-
CCDS55490.1
- UniProtKB/TrEMBL
-
A0A494C0K8
- Related
- ENSP00000359947.1, ENST00000370910.5
- Conserved Domains (2) summary
-
- smart00410
Location:779 → 859
- IG_like; Immunoglobulin like
- cl11960
Location:1152 → 1238
- Ig; Immunoglobulin domain
-
NM_001170963.2 → NP_001164434.1 immunoglobulin superfamily member 1 isoform 2 precursor
See identical proteins and their annotated locations for NP_001164434.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR, and 3' coding region and UTR compared to variant 3. The resulting protein (isoform 2) has a distinct C-terminus and is shorter than isoform 3. Variants 2 and 5 encode the same protein.
- Source sequence(s)
-
AL590806
- Consensus CDS
-
CCDS14630.1
- UniProtKB/Swiss-Prot
-
Q8N6C5
- Related
- ENSP00000359937.1, ENST00000370900.5
- Conserved Domains (2) summary
-
- smart00410
Location:142 → 200
- IG_like; Immunoglobulin like
- cl11960
Location:130 → 222
- Ig; Immunoglobulin domain
-
NM_001555.5 → NP_001546.2 immunoglobulin superfamily member 1 isoform 1 precursor
See identical proteins and their annotated locations for NP_001546.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) uses an alternate in-frame splice site in a 3' exon compared to variant 3. The resulting protein (isoform 1) is shorter compared to isoform 3.
- Source sequence(s)
-
AL590806
- Consensus CDS
-
CCDS14629.1
- UniProtKB/Swiss-Prot
- B5MEG2, H9KV64, O15070, Q8N6C5, Q9NTC8
- UniProtKB/TrEMBL
-
A0A494C0K8
- Related
- ENSP00000355010.3, ENST00000361420.8
- Conserved Domains (2) summary
-
- smart00410
Location:788 → 868
- IG_like; Immunoglobulin like
- cl11960
Location:1161 → 1247
- Ig; Immunoglobulin domain
-
NM_205833.4 → NP_991402.1 immunoglobulin superfamily member 1 isoform 2 precursor
See identical proteins and their annotated locations for NP_991402.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 3' coding region and UTR compared to variant 3. The resulting protein (isoform 2) has a distinct C-terminus and is shorter than isoform 3. Variants 2 and 5 encode the same protein.
- Source sequence(s)
-
AL590806
- Consensus CDS
-
CCDS14630.1
- UniProtKB/Swiss-Prot
-
Q8N6C5
- Related
- ENSP00000359938.4, ENST00000370901.4
- Conserved Domains (2) summary
-
- smart00410
Location:142 → 200
- IG_like; Immunoglobulin like
- cl11960
Location:130 → 222
- Ig; Immunoglobulin domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000023.11 Reference GRCh38.p14 Primary Assembly
- Range
-
131273506..131289464 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011531330.2 → XP_011529632.1 immunoglobulin superfamily member 1 isoform X1
See identical proteins and their annotated locations for XP_011529632.1
- UniProtKB/TrEMBL
-
A0A494C0K8
- Conserved Domains (2) summary
-
- smart00410
Location:793 → 873
- IG_like; Immunoglobulin like
- cl11960
Location:1166 → 1252
- Ig; Immunoglobulin domain
-
XM_047442086.1 → XP_047298042.1 immunoglobulin superfamily member 1 isoform X2
- UniProtKB/Swiss-Prot
- B5MEG2, H9KV64, O15070, Q8N6C5, Q9NTC8
- UniProtKB/TrEMBL
-
A0A494C0K8
- Related
- ENSP00000498607.1, ENST00000652189.1
-
XM_047442087.1 → XP_047298043.1 immunoglobulin superfamily member 1 isoform X2
- UniProtKB/Swiss-Prot
- B5MEG2, H9KV64, O15070, Q8N6C5, Q9NTC8
- UniProtKB/TrEMBL
-
A0A494C0K8
- Related
- ENSP00000498789.1, ENST00000651556.1
-
XM_047442085.1 → XP_047298041.1 immunoglobulin superfamily member 1 isoform X1
- UniProtKB/TrEMBL
-
A0A494C0K8
-
XM_047442088.1 → XP_047298044.1 immunoglobulin superfamily member 1 isoform X4
- UniProtKB/TrEMBL
-
A0A494C0K8
-
XM_011531334.3 → XP_011529636.1 immunoglobulin superfamily member 1 isoform X5
- UniProtKB/TrEMBL
-
A0A494C0K8
- Conserved Domains (2) summary
-
- smart00410
Location:793 → 873
- IG_like; Immunoglobulin like
- cl11960
Location:974 → 1060
- Ig; Immunoglobulin domain
-
XM_011531333.3 → XP_011529635.1 immunoglobulin superfamily member 1 isoform X3
- UniProtKB/TrEMBL
-
A0A494C0K8
- Conserved Domains (2) summary
-
- smart00410
Location:793 → 873
- IG_like; Immunoglobulin like
- cl11960
Location:1083 → 1169
- Ig; Immunoglobulin domain
Alternate T2T-CHM13v2.0
Genomic
-
NC_060947.1 Alternate T2T-CHM13v2.0
- Range
-
129597609..129613567 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054327006.1 → XP_054182981.1 immunoglobulin superfamily member 1 isoform X1
- UniProtKB/TrEMBL
-
A0A494C0K8
-
XM_054327007.1 → XP_054182982.1 immunoglobulin superfamily member 1 isoform X2
- UniProtKB/Swiss-Prot
- B5MEG2, H9KV64, O15070, Q8N6C5, Q9NTC8
- UniProtKB/TrEMBL
-
A0A494C0K8
-
XM_054327008.1 → XP_054182983.1 immunoglobulin superfamily member 1 isoform X2
- UniProtKB/Swiss-Prot
- B5MEG2, H9KV64, O15070, Q8N6C5, Q9NTC8
- UniProtKB/TrEMBL
-
A0A494C0K8
-
XM_054327005.1 → XP_054182980.1 immunoglobulin superfamily member 1 isoform X1
- UniProtKB/TrEMBL
-
A0A494C0K8
-
XM_054327010.1 → XP_054182985.1 immunoglobulin superfamily member 1 isoform X4
- UniProtKB/TrEMBL
-
A0A494C0K8
-
XM_054327011.1 → XP_054182986.1 immunoglobulin superfamily member 1 isoform X5
- UniProtKB/TrEMBL
-
A0A494C0K8
-
XM_054327009.1 → XP_054182984.1 immunoglobulin superfamily member 1 isoform X3
- UniProtKB/TrEMBL
-
A0A494C0K8