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    rpoN RNA polymerase factor sigma-54 [ Cereibacter sphaeroides 2.4.1 ]

    Gene ID: 3718440, updated on 26-Dec-2024

    Summary

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    Gene symbol
    rpoN
    Gene description
    RNA polymerase factor sigma-54
    Locus tag
    RSP_RS10925
    Gene type
    protein coding
    Organism
    Cereibacter sphaeroides 2.4.1 (strain: 2.4.1, culture-collection: ATCC:BAA-808, type-material: type strain of Rhodobacter sphaeroides)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Paracoccaceae; Cereibacter
    Old locus tag
    RSP_0527
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    Genomic context

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    Location:
    chromosome: 1
    Sequence:
    Chromosome: 1; NC_007493.2 (2264540..2265844, complement)

    Chromosome 1 - NC_007493.2Genomic Context describing neighboring genes Neighboring gene PAQR family membrane homeostasis protein TrhA Neighboring gene DUF1810 domain-containing protein Neighboring gene nitrogenase stabilizing/protective protein NifW Neighboring gene homocitrate synthase Neighboring gene cysteine desulfurase NifS

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_007493.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolutionary origin of the Rhodobacter sphaeroides specialized RpoN sigma factors. Domenzain C, et al. FEMS Microbiol Lett, 2012 Feb. PMID 22093079
    2. Transcriptional specificity of RpoN1 and RpoN2 involves differential recognition of the promoter sequences and specific interaction with the cognate activator proteins. Poggio S, et al. J Biol Chem, 2006 Sep 15. PMID 16854992
    3. The -24/-12 promoter comes of age. Thöny B, et al. FEMS Microbiol Rev, 1989 Dec. PMID 2517036

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Multiplication origin of the different rpoN copies that occurred after the Rhodobacter clade separated.
      Title: Evolutionary origin of the Rhodobacter sphaeroides specialized RpoN sigma factors.
    2. RpoN1 and RpoN2 interact specifically with their respective activator protein
      Title: Transcriptional specificity of RpoN1 and RpoN2 involves differential recognition of the promoter sequences and specific interaction with the cognate activator proteins.
    Submit: New GeneRIF Correction

    General protein information

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    Preferred Names
    RNA polymerase factor sigma-54

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_007493.2 Reference assembly

      Range
      2264540..2265844 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_011338295.1 RNA polymerase factor sigma-54 [Cereibacter sphaeroides]

      See identical proteins and their annotated locations for WP_011338295.1

      UniProtKB/Swiss-Prot
      Q01194
      UniProtKB/TrEMBL
      Q3J0I5
    Nucleotide Protein
    Heading Accession and Version

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