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    Fam177a family with sequence similarity 177, member A [ Mus musculus (house mouse) ]

    Gene ID: 73385, updated on 9-Dec-2024

    Summary

    Official Symbol
    Fam177aprovided by MGI
    Official Full Name
    family with sequence similarity 177, member Aprovided by MGI
    Primary source
    MGI:MGI:1920635
    See related
    Ensembl:ENSMUSG00000095595 AllianceGenome:MGI:1920635
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    C14orf24; Fam177a1; 1700047I17Rik; D730001C10Rik; 1700047I17Rik1
    Summary
    Orthologous to human FAM177A1 (family with sequence similarity 177 member A1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Ubiquitous expression in testis adult (RPKM 16.2), CNS E18 (RPKM 12.4) and 27 other tissues See more
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    Genomic context

    See Fam177a in Genome Data Viewer
    Location:
    12 C1; 12 23.87 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (55171313..55188889)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (55124435..55142104)

    Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 2700097O09 gene Neighboring gene RNA polymerase II, polypeptide H Neighboring gene signal recognition particle 54A Neighboring gene STARR-positive B cell enhancer mm9_chr12:56256085-56256386 Neighboring gene predicted gene 2436 Neighboring gene signal recognition particle 54B Neighboring gene family with sequence similarity 177 member A2 Neighboring gene predicted gene 2446

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_028527.2NP_082803.1  protein FAM177A1

      See identical proteins and their annotated locations for NP_082803.1

      Status: VALIDATED

      Source sequence(s)
      AC157515
      Consensus CDS
      CCDS25913.1
      UniProtKB/Swiss-Prot
      Q8BR63, Q9D9M7
      UniProtKB/TrEMBL
      Q3TVY3
      Related
      ENSMUSP00000137299.2, ENSMUST00000177768.3
      Conserved Domains (1) summary
      pfam14774
      Location:35139
      FAM177; FAM177 family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000078.7 Reference GRCm39 C57BL/6J

      Range
      55171313..55188889
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)