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    1700027F06Rik RIKEN cDNA 1700027F06 gene [ Mus musculus (house mouse) ]

    Gene ID: 72268, updated on 22-Oct-2024

    Summary

    Official Symbol
    1700027F06Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 1700027F06 geneprovided by MGI
    Primary source
    MGI:MGI:1919518
    See related
    Ensembl:ENSMUSG00000107737 AllianceGenome:MGI:1919518
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Restricted expression toward testis adult (RPKM 21.6) See more
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    Genomic context

    See 1700027F06Rik in Genome Data Viewer
    Location:
    6; 6 F2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (124340241..124341445, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (124363282..124364486, complement)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene CD163 antigen Neighboring gene predicted gene, 52877 Neighboring gene RIKEN cDNA 1700013D24 gene Neighboring gene RIKEN cDNA D830015G05 gene Neighboring gene peroxisomal biogenesis factor 5 Neighboring gene STARR-positive B cell enhancer ABC_E3680 Neighboring gene calsyntenin 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_131162.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC124470
      Related
      ENSMUST00000334852.1

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      124340241..124341445 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)