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    gag protein [ Saccharomyces cerevisiae S288C ]

    Gene ID: 851795, updated on 9-Dec-2024

    Summary

    Official Full Name
    gag protein
    Primary source
    SGD:S000007409
    Locus tag
    YDR210C-C
    See related
    AllianceGenome:SGD:S000007409; FungiDB:YDR210C-C; VEuPathDB:YDR210C-C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Also known as
    YDR210W-C
    Summary
    Predicted to enable RNA binding activity. Predicted to be involved in retrotransposition. Predicted to be located in retrotransposon nucleocapsid. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    Location:
    chromosome: IV
    Exon count:
    1
    Sequence:
    Chromosome: IV; NC_001136.10 (882605..883927, complement)

    Chromosome IV - NC_001136.10Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene gag protein Neighboring gene gag-pol fusion protein Neighboring gene cysteine-rich palmitoylated domain-containing protein CPP2 Neighboring gene gag-pol fusion protein Neighboring gene tRNA-Ile Neighboring gene translation initiation factor eIF2B catalytic subunit epsilon

    Interactions

    General gene information

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables RNA binding  
    enables RNA binding PubMed 
    Process Evidence Code Pubs
    involved_in retrotransposition PubMed 
    involved_in viral translational frameshifting  
    Component Evidence Code Pubs
    located_in cytoplasm  
    located_in retrotransposon nucleocapsid PubMed 

    General protein information

    Preferred Names
    gag protein
    NP_620388.3
    • Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001136.10 Reference assembly

      Range
      882605..883927 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001184435.3 → NP_620388.3  TPA: gag protein [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_620388.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VSJ4, Q12441
      UniProtKB/TrEMBL
      A7A2A6
      Conserved Domains (1) summary
      pfam01021
      Location:17 → 114
      TYA; TYA transposon protein
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