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    Prok2 prokineticin 2 [ Mus musculus (house mouse) ]

    Gene ID: 50501, updated on 27-Nov-2024

    Summary

    Official Symbol
    Prok2provided by MGI
    Official Full Name
    prokineticin 2provided by MGI
    Primary source
    MGI:MGI:1354178
    See related
    Ensembl:ENSMUSG00000030069 AllianceGenome:MGI:1354178
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Bv8; PK2; Prok1
    Summary
    Predicted to enable G protein-coupled receptor binding activity. Acts upstream of or within circadian rhythm. Predicted to be located in extracellular region. Is expressed in several structures, including genitourinary system; heart; liver; lung; and telencephalon. Human ortholog(s) of this gene implicated in hypogonadotropic hypogonadism 4 with or without anosmia. Orthologous to human PROK2 (prokineticin 2). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Restricted expression toward testis adult (RPKM 10.4) See more
    Orthologs
    NEW
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    Genomic context

    See Prok2 in Genome Data Viewer
    Location:
    6 D3; 6 46.29 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (99687833..99703368, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (99711299..99726392, complement)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4E member 3 Neighboring gene predicted gene, 52869 Neighboring gene G protein-coupled receptor 27 Neighboring gene predicted gene, 26748 Neighboring gene basic transcription factor 3, pseudogene 6

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables G protein-coupled receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables G protein-coupled receptor binding TAS
    Traceable Author Statement
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in angiogenesis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in angiogenesis ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in chemotaxis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in chemotaxis ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of_or_within circadian rhythm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in coronary vasculature development TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in endothelial cell proliferation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in endothelial cell proliferation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in endothelial cell proliferation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in epicardium-derived cardiac endothelial cell differentiation TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in epicardium-derived cardiac vascular smooth muscle cell differentiation TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in negative regulation of apoptotic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of apoptotic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in neuropeptide signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of smooth muscle contraction ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of smooth muscle contraction ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in spermatogenesis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in spermatogenesis ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in vasculogenesis involved in coronary vascular morphogenesis TAS
    Traceable Author Statement
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    prokineticin-2
    Names
    Bombina variegata 8 kD protein
    Bombina variegata 8kDa protein
    Bv 8 homolog (Bombina variegata)
    prokineticin 1
    protein Bv8 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001037539.3NP_001032628.1  prokineticin-2 isoform 2 precursor

      See identical proteins and their annotated locations for NP_001032628.1

      Status: VALIDATED

      Source sequence(s)
      AC122929
      Consensus CDS
      CCDS20388.1
      UniProtKB/Swiss-Prot
      Q9QXU7
      Related
      ENSMUSP00000098678.5, ENSMUST00000101120.11
      Conserved Domains (1) summary
      pfam06607
      Location:23104
      Prokineticin; Prokineticin
    2. NM_001170419.2NP_001163890.1  prokineticin-2 isoform 3 precursor

      See identical proteins and their annotated locations for NP_001163890.1

      Status: VALIDATED

      Source sequence(s)
      AC122929
      Consensus CDS
      CCDS51864.1
      UniProtKB/TrEMBL
      G3X8R6
      Related
      ENSMUSP00000008273.7, ENSMUST00000008273.8
      Conserved Domains (1) summary
      pfam06607
      Location:3262
      Prokineticin; Prokineticin
    3. NM_001401499.1NP_001388428.1  prokineticin-2 isoform 4 precursor

      Status: VALIDATED

      Source sequence(s)
      AC122929
      Related
      ENSMUSP00000144760.2, ENSMUST00000203738.2
    4. NM_015768.3NP_056583.1  prokineticin-2 isoform 1 precursor

      See identical proteins and their annotated locations for NP_056583.1

      Status: VALIDATED

      Source sequence(s)
      AC122929
      Consensus CDS
      CCDS20389.1
      UniProtKB/Swiss-Prot
      B7ZMX7, Q9QXU5, Q9QXU6, Q9QXU7
      UniProtKB/TrEMBL
      Q14AB2
      Related
      ENSMUSP00000032152.9, ENSMUST00000032152.14
      Conserved Domains (1) summary
      pfam06607
      Location:23125
      Prokineticin; Prokineticin

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      99687833..99703368 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)