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    vib vibrator [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42306, updated on 9-Dec-2024

    Summary

    Official Symbol
    vibprovided by FlyBase
    Official Full Name
    vibratorprovided by FlyBase
    Primary source
    FLYBASE:FBgn0267975
    Locus tag
    Dmel_CG5269
    See related
    AllianceGenome:FB:FBgn0267975
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    0450/02; 1104/16; anon-WO0142479.3; anon-WO0172774.12; anon-WO0172774.16; anon-WO0172774.28; CG5269; Dm-PITPalpha; Dmel\CG5269; gio; Gio; giotto; l(3)j4A3; l(3)j5A6; l(3)j7A3; l(3)j7C8; l(3)S045002; l(3)S045002c; l(3)S110416; PITP; PITP-DM; Vib
    Summary
    Predicted to enable phospholipid binding activity and phospholipid transporter activity. Involved in cytoskeleton-dependent cytokinesis; meiotic spindle organization; and spermatocyte division. Located in several cellular components, including Nebenkern; cleavage furrow; and spindle envelope. Is expressed in several structures, including adult head; adult heart; embryonic/larval fat body; gut section; and spermatocyte. Orthologous to human PITPNA (phosphatidylinositol transfer protein alpha) and PITPNB (phosphatidylinositol transfer protein beta). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See vib in Genome Data Viewer
    Location:
    91F11-91F12; 3-66 cM
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (19215434..19226651, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (15041156..15052373, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene mayday Neighboring gene long non-coding RNA:CR46039 Neighboring gene long non-coding RNA:CR46393 Neighboring gene cryptochrome Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Bibliography

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables phosphatidylcholine binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables phosphatidylcholine transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables phosphatidylinositol binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables phosphatidylinositol transfer activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables phospholipid transporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in actomyosin contractile ring contraction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in cleavage furrow ingression IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in male meiosis cytokinesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in meiosis I cytokinesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in meiosis II cytokinesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in meiotic cytokinesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in meiotic spindle organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in phospholipid transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in spermatocyte division IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in spermatogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in Nebenkern IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cleavage furrow IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nuclear membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in spindle envelope IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    vibrator
    Names
    CG5269-PA
    CG5269-PB
    CG5269-PC
    PITP
    giotto
    lethal (3) S045002c
    lethal (3) S110416
    lethal (3) j5A6
    vib-PA
    vib-PB
    vib-PC

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      19215434..19226651 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001275797.1NP_001262726.1  vibrator, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262726.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4KGG5, Q8T3L2
      Conserved Domains (1) summary
      cd08888
      Location:2261
      SRPBCC_PITPNA-B_like; Lipid-binding SRPBCC domain of mammalian PITPNA, -B, and related proteins (Class I PITPs)
    2. NM_001300473.1NP_001287402.1  vibrator, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287402.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8T3L2, Q9VDY8
      Conserved Domains (1) summary
      cd08888
      Location:2260
      SRPBCC_PITPNA-B_like; Lipid-binding SRPBCC domain of mammalian PITPNA, -B, and related proteins (Class I PITPs)
    3. NM_079680.2NP_524404.1  vibrator, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524404.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8T3L2, Q9VDY8
      Related
      FBpp0083159, FBtr0083745
      Conserved Domains (1) summary
      cd08888
      Location:2260
      SRPBCC_PITPNA-B_like; Lipid-binding SRPBCC domain of mammalian PITPNA, -B, and related proteins (Class I PITPs)