U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CG5435 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34657, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CG5435provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0032431
    Locus tag
    Dmel_CG5435
    See related
    AllianceGenome:FB:FBgn0032431
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:AT11334; Dmel\CG5435
    Summary
    Is expressed in several structures, including embryonic head sensory system; sensory nervous system primordium; and spermatozoon. Orthologous to human CFAP276 (cilia and flagella associated protein 276). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CG5435 in Genome Data Viewer
    Location:
    33E4-33E4; 2-46 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (12429827..12430892, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (12429827..12430892, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Fam92 Neighboring gene uncharacterized protein Neighboring gene tRNA methyltransferase 1 Neighboring gene SR family splicing factor SC35 Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans. Wei P, et al. Genome Res, 2020 Jan. PMID 31722958, Free PMC Article
    2. A global in vivo Drosophila RNAi screen identifies NOT3 as a conserved regulator of heart function. Neely GG, et al. Cell, 2010 Apr 2. PMID 20371351, Free PMC Article
    3. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article
    4. Systematic genetic analysis of muscle morphogenesis and function in Drosophila. Schnorrer F, et al. Nature, 2010 Mar 11. PMID 20220848
    5. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article

    See all (19) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    Names
    CG5435-PA
    CG5435-PB

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      12429827..12430892 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001298944.1 → NP_001285873.1  uncharacterized protein Dmel_CG5435, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285873.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VK88
      Conserved Domains (1) summary
      pfam12494
      Location:41 → 151
      DUF3695; Protein of unknown function (DUF3695)

    2. NM_135723.4 → NP_609567.2  uncharacterized protein Dmel_CG5435, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609567.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VK88
      Related
      FBpp0079968
      Conserved Domains (1) summary
      pfam12494
      Location:41 → 151
      DUF3695; Protein of unknown function (DUF3695)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VK88 Q9VK88

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools