U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CG14414 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 32394, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CG14414provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0030571
    Locus tag
    Dmel_CG14414
    See related
    AllianceGenome:FB:FBgn0030571
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:AT01764; cg14414; Dmel\CG14414
    Summary
    Predicted to enable mRNA binding activity. Is expressed in several structures, including anterior endoderm; inclusive hindgut primordium; mesoderm; and posterior endoderm. Orthologous to human RBM18 (RNA binding motif protein 18). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CG14414 in Genome Data Viewer
    Location:
    12F1-12F1; 1-49 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (14580600..14582174)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (14474633..14476207)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44110 Neighboring gene long non-coding RNA:CR45521 Neighboring gene nmdyn-D6 Neighboring gene mitochondrial ribosomal protein S25 Neighboring gene sobremesa

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The drosophila melanogaster genome: translation factors and RNA binding proteins. Lasko P. J Cell Biol, 2000 Jul 24. PMID 10908586, Free PMC Article
    2. Putative synaptic genes defined from a Drosophila whole body developmental transcriptome by a machine learning approach. Pazos Obregón F, et al. BMC Genomics, 2015 Sep 15. PMID 26370122, Free PMC Article
    3. Genes conserved in bilaterians but jointly lost with Myc during nematode evolution are enriched in cell proliferation and cell migration functions. Erives AJ. Dev Genes Evol, 2015 Sep. PMID 26173873, Free PMC Article
    4. Transient junction anisotropies orient annular cell polarization in the Drosophila airway tubes. Hosono C, et al. Nat Cell Biol, 2015 Dec. PMID 26551273
    5. Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes. López-Varea A, et al. G3 (Bethesda), 2021 Dec 8. PMID 34599810, Free PMC Article

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables RNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables mRNA binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    Names
    CG14414-PA
    CG14414-PC
    CG14414-PD
    CG14414-PE
    NP_727783.3
    • unusual splice

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      14580600..14582174
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_176729.3 → NP_788902.1  uncharacterized protein Dmel_CG14414, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_788902.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MZG3, Q8SY84
      Related
      FBpp0073749
      Conserved Domains (2) summary
      COG0724
      Location:11 → 61
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cl17169
      Location:1 → 50
      RRM_SF; RNA recognition motif (RRM) superfamily

    2. NM_001298311.1 → NP_001285240.1  uncharacterized protein Dmel_CG14414, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285240.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      X2JBU2
      Conserved Domains (2) summary
      COG0724
      Location:22 → 126
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cd12355
      Location:28 → 115
      RRM_RBM18; RNA recognition motif in eukaryotic RNA-binding protein 18 and similar proteins

    3. NM_167410.4 → NP_727783.3  uncharacterized protein Dmel_CG14414, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_727783.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VY29
      Conserved Domains (2) summary
      COG0724
      Location:22 → 118
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cd12355
      Location:28 → 107
      RRM_RBM18; RNA recognition motif in eukaryotic RNA-binding protein 18 and similar proteins

    4. NM_132736.3 → NP_572964.1  uncharacterized protein Dmel_CG14414, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572964.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MZG3, Q8SY84
      Related
      FBpp0073747
      Conserved Domains (2) summary
      COG0724
      Location:11 → 61
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cl17169
      Location:1 → 50
      RRM_SF; RNA recognition motif (RRM) superfamily
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8MZG3 Q8MZG3
    Q8SY84 Q8SY84
    Q9VY29 Q9VY29
    X2JBU2 X2JBU2

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools