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    Boh2 Buddy of Hmr 2 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34559, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Boh2provided by FlyBase
    Official Full Name
    Buddy of Hmr 2provided by FlyBase
    Primary source
    FLYBASE:FBgn0032354
    Locus tag
    Dmel_CG4788
    See related
    AllianceGenome:FB:FBgn0032354
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG4788; Dmel\CG4788
    Summary
    Located in pericentric heterochromatin. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Boh2 in Genome Data Viewer
    Location:
    32E1-32E1; 2-44 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (11179032..11180430)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (11179032..11180430)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Ca2+-channel-protein-beta-subunit Neighboring gene Vitelline membrane 32E Neighboring gene long non-coding RNA:CR43859 Neighboring gene abrupt Neighboring gene CENP-meta

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Integrity of the HMR complex is necessary for centromeric binding and reproductive isolation in Drosophila. Lukacs A, et al. PLoS Genet, 2021 Aug. PMID 34424906, Free PMC Article
    2. [Identification of C(2)M interacting proteins by yeast two-hybrid screening]. Yue SS, et al. Yi Chuan, 2015 Nov. PMID 26582530
    3. The RNA-binding protein Arrest (Bruno) regulates alternative splicing to enable myofibril maturation in Drosophila flight muscle. Spletter ML, et al. EMBO Rep, 2015 Feb. PMID 25532219, Free PMC Article
    4. A pair of centromeric proteins mediates reproductive isolation in Drosophila species. Thomae AW, et al. Dev Cell, 2013 Nov 25. PMID 24239514
    5. Genome-wide analysis of Staufen-associated mRNAs identifies secondary structures that confer target specificity. Laver JD, et al. Nucleic Acids Res, 2013 Nov. PMID 23945942, Free PMC Article

    See all (25) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    located_in pericentric heterochromatin IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    buddy of Hmr 2
    Names
    Boh2-PA
    Boh2-PB
    CG4788-PA
    CG4788-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      11179032..11180430
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135655.4 → NP_609499.1  buddy of Hmr 2, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609499.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MZ05, Q9VKI2
      Related
      FBpp0079791
      Conserved Domains (1) summary
      cl11423
      Location:49 → 119
      VirB9_CagX_TrbG; VirB9/CagX/TrbG, a component of the type IV secretion system

    2. NM_001298909.1 → NP_001285838.1  buddy of Hmr 2, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285838.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MZ05, Q9VKI2
      Conserved Domains (1) summary
      cl11423
      Location:49 → 119
      VirB9_CagX_TrbG; VirB9/CagX/TrbG, a component of the type IV secretion system
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8MZ05 Q8MZ05
    Q9VKI2 Q9VKI2

    Gene LinkOut

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