U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CG13288 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 38665, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CG13288provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0035648
    Locus tag
    Dmel_CG13288
    See related
    AllianceGenome:FB:FBgn0035648
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    dmCG13288; Dmel\CG13288
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CG13288 in Genome Data Viewer
    Location:
    64F5-64F5; 3-15 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (5907381..5917540)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (5900481..5910640)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR45167 Neighboring gene P[[i]]-sensitive XPR1 orthologue Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Fire exit is a potential four transmembrane protein expressed in developing Drosophila glia. With S, et al. Genesis, 2003 Mar. PMID 12640618
    2. Pasiflora proteins are novel core components of the septate junction. Deligiannaki M, et al. Development, 2015 Sep 1. PMID 26329602, Free PMC Article
    3. The impact of genome variation and diet on the metabolic phenotype and microbiome composition of Drosophila melanogaster. Jehrke L, et al. Sci Rep, 2018 Apr 18. PMID 29670218, Free PMC Article
    4. The genetic basis for variation in olfactory behavior in Drosophila melanogaster. Arya GH, et al. Chem Senses, 2015 May. PMID 25687947, Free PMC Article
    5. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article

    See all (22) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    mobile_element

    • Loc: 5910086-5910271 mobile_element_type = transposon:pogo{}932

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    located_in membrane ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    Names
    CG13288-PB
    CG13288-PC

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      5907381..5917540
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001104052.2 → NP_001097522.1  uncharacterized protein Dmel_CG13288, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001097522.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4QQ36, Q9VRR1
      Conserved Domains (1) summary
      pfam15860
      Location:75 → 163
      DUF4728; Domain of unknown function (DUF4728)

    2. NM_001274526.1 → NP_001261455.1  uncharacterized protein Dmel_CG13288, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261455.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PEG2
      Conserved Domains (1) summary
      pfam15860
      Location:75 → 163
      DUF4728; Domain of unknown function (DUF4728)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9PEG2 M9PEG2
    Q9VRR1 Q9VRR1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools