U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    MSN1 Msn1p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 854033, updated on 9-Dec-2024

    Summary

    Official Symbol
    MSN1
    Official Full Name
    Msn1p
    Primary source
    SGD:S000005476
    Locus tag
    YOL116W
    See related
    AllianceGenome:SGD:S000005476; FungiDB:YOL116W; VEuPathDB:YOL116W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Also known as
    FUP1; HRB382; MSS10; PHD2
    Summary
    Enables sequence-specific DNA binding activity. Involved in several processes, including cellular hyperosmotic salinity response; positive regulation of growth of unicellular organism as a thread of attached cells; and positive regulation of macromolecule metabolic process. Located in nucleus. [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See MSN1 in Genome Data Viewer
    Location:
    chromosome: XV
    Exon count:
    1
    Sequence:
    Chromosome: XV; NC_001147.6 (99809..100957)

    Chromosome XV - NC_001147.6Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Rri2p Neighboring gene non-canonical poly(A) polymerase PAP2 Neighboring gene Pth4p

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables sequence-specific DNA binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm HDA PubMed 
    located_in nucleus HDA PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Msn1p
    NP_014525.1
    • Transcriptional activator; involved in regulation of invertase and glucoamylase expression, invasive growth and pseudohyphal differentiation, iron uptake, chromium accumulation, and response to osmotic stress; localizes to the nucleus; relative distribution to the nucleus increases upon DNA replication stress

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001147.6 Reference assembly

      Range
      99809..100957
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001183370.1NP_014525.1  TPA: Msn1p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_014525.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6W1V1, P22148, Q12227, Q9URF6
      UniProtKB/TrEMBL
      B3LIU9, C7GSS0, G2WMC0, N1NXH5
      Conserved Domains (1) summary
      pfam12550
      Location:278356
      GCR1_C; Transcriptional activator of glycolytic enzymes