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    cDIP Common Dpr-interacting protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42512, updated on 9-Dec-2024

    Summary

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    Official Symbol
    cDIPprovided by FlyBase
    Official Full Name
    Common Dpr-interacting proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0038865
    Locus tag
    Dmel_CG10824
    See related
    AllianceGenome:FB:FBgn0038865
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    10824; CG10824; CT11359; DIPc; Dmel\CG10824
    Summary
    Orthologous to human NRROS (negative regulator of reactive oxygen species) and TSKU (tsukushi, small leucine rich proteoglycan). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See cDIP in Genome Data Viewer
    Location:
    93C2-93C2; 3-71 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (21159238..21161092, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (16984960..16986814, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene SNF4/AMP-activated protein kinase gamma subunit Neighboring gene Ubiquitin specific protease 8 Neighboring gene medial glomeruli Neighboring gene uncharacterized protein Neighboring gene Sensory neuron membrane protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cell surface molecule, Klingon, mediates the refinement of synaptic specificity in the Drosophila visual system. Shimozono M, et al. Genes Cells, 2019 Jul. PMID 31124270
    2. An essential role for a CD36-related receptor in pheromone detection in Drosophila. Benton R, et al. Nature, 2007 Nov 8. PMID 17943085
    3. RNA-binding profiles of Drosophila CPEB proteins Orb and Orb2. Stepien BK, et al. Proc Natl Acad Sci U S A, 2016 Nov 8. PMID 27791065, Free PMC Article
    4. Natural variation of ebony gene controlling thoracic pigmentation in Drosophila melanogaster. Takahashi A, et al. Genetics, 2007 Oct. PMID 17660557, Free PMC Article
    5. A Drosophila model of the neurodegenerative disease SCA17 reveals a role of RBP-J/Su(H) in modulating the pathological outcome. Ren J, et al. Hum Mol Genet, 2011 Sep 1. PMID 21653638, Free PMC Article

    See all (39) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    common Dpr-interacting protein
    Names
    CG10824-PA
    cDIP-PA
    common DIP

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      21159238..21161092 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142694.3 → NP_650951.1  common Dpr-interacting protein [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650951.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      E3CTT6, Q95U03, Q9VDD5
      Related
      FBpp0083431
      Conserved Domains (4) summary
      cd00116
      Location:143 → 407
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:143 → 166
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:393 → 433
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:166 → 225
      LRR_8; Leucine rich repeat
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VDD5 Q9VDD5

    Gene LinkOut

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