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    rsm1 zinc finger C3HC-type containing RNA export factor Rsm1 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2538984, updated on 18-Sep-2024

    Summary

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    Official Symbol
    rsm1
    Official Full Name
    zinc finger C3HC-type containing RNA export factor Rsm1
    Primary source
    PomBase:SPCC1753.05
    Locus tag
    SPOM_SPCC1753.05
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See rsm1 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    1
    Sequence:
    Chromosome: III; NC_003421.2 (1551563..1554137)

    Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene meiotic recombination protein Rec7 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene 3'(2'),5'-bisphosphate nucleotidase/inositol-1,4-bisphosphate 1-phosphatase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene TORC1 subunit Tco89 Neighboring gene uridine kinase/uracil phosphoribosyltransferase Neighboring gene serine/threonine protein kinase Ppk33

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003421.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structure of the pre-mRNA leakage 39-kDa protein reveals a single domain of integrated zf-C3HC and Rsm1 modules. Hashimoto H, et al. Sci Rep, 2022 Oct 21. PMID 36271106, Free PMC Article
    2. Schizosaccharomyces pombe rsm1 genetically interacts with spmex67, which is involved in mRNA export. Yoon JH. J Microbiol, 2004 Mar. PMID 15357289
    3. ZC3HC1 Is a Novel Inherent Component of the Nuclear Basket, Resident in a State of Reciprocal Dependence with TPR. Gunkel P, et al. Cells, 2021 Jul 30. PMID 34440706, Free PMC Article
    4. Post-transcriptional regulation of meiotic genes by a nuclear RNA silencing complex. Egan ED, et al. RNA, 2014 Jun. PMID 24713849, Free PMC Article
    5. A central role for TOR signalling in a yeast model for juvenile CLN3 disease. Bond ME, et al. Microb Cell, 2015 Nov 11. PMID 28357272, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables structural constituent of nuclear pore TAS
    Traceable Author Statement
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in nuclear mRNA surveillance of spliceosomal pre-mRNA splicing TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cytosol HDA PubMed 
    part_of nuclear pore nuclear basket ISO
    Inferred from Sequence Orthology
    more info
    		 PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    zinc finger C3HC-type containing RNA export factor Rsm1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003421.2 Reference assembly

      Range
      1551563..1554137
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001023221.3 → NP_588231.1  zinc finger C3HC-type containing RNA export factor Rsm1 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_588231.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O94506
      Conserved Domains (2) summary
      pfam07967
      Location:40 → 174
      zf-C3HC; C3HC zinc finger-like
      pfam08600
      Location:201 → 252
      Rsm1; Rsm1-like
    Nucleotide Protein
    Heading Accession and Version

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