U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    EMW1 tetratricopeptide repeat-containing protein EMW1 [ Saccharomyces cerevisiae S288C ]

    Gene ID: 855403, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    EMW1
    Official Full Name
    tetratricopeptide repeat-containing protein EMW1
    Primary source
    SGD:S000005257
    Locus tag
    YNL313C
    See related
    AllianceGenome:SGD:S000005257; FungiDB:YNL313C; VEuPathDB:YNL313C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Involved in fungal-type cell wall organization. Located in cytoplasm and nucleus. Orthologous to human TTC27 (tetratricopeptide repeat domain 27). [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See EMW1 in Genome Data Viewer
    Location:
    chromosome: XIV
    Exon count:
    1
    Sequence:
    Chromosome: XIV; NC_001146.8 (45308..48022, complement)

    Chromosome XIV - NC_001146.8Genomic Context describing neighboring genes Neighboring gene Atp11p Neighboring gene Dal82p Neighboring gene Rfa2p Neighboring gene putative SCF ubiquitin ligase complex subunit SKP2

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_001146.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Emw1p/YNL313cp is essential for maintenance of the cell wall in Saccharomyces cerevisiae. Sipling T, et al. Microbiology (Reading), 2011 Apr. PMID 21273246
    2. Generation of Saccharomyces cerevisiae deletants and basic phenotypic analysis of eight novel genes from the left arm of chromosome XIV. Maftahi M, et al. Yeast, 1998 Feb. PMID 9544246
    3. Identification of new proteins related with cisplatin resistance in Saccharomyces cerevisiae. Burgos-Molina AM, et al. Appl Microbiol Biotechnol, 2021 Mar. PMID 33576883
    4. Comprehensive analysis of genes involved in the oxidative stress tolerance using yeast heterozygous deletion collection. Okada N, et al. FEMS Yeast Res, 2014 May. PMID 24410772
    5. Systematic Screening of Penetratin's Protein Targets by Yeast Proteome Microarrays. Shah P, et al. Int J Mol Sci, 2022 Jan 10. PMID 35054898, Free PMC Article

    See all (42) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in cell wall organization IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in fungal-type cell wall organization IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm HDA PubMed 
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus HDA PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    tetratricopeptide repeat-containing protein EMW1
    NP_014086.1
    • Essential conserved protein with a role in cell wall integrity; contains six TPR (tetratricopeptide repeat) domains clustered in the C-terminal region; conditional mutant is suppressed by overexpression of GFA1; protein abundance increases in response to DNA replication stress

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001146.8 Reference assembly

      Range
      45308..48022 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001183151.1 → NP_014086.1  TPA: tetratricopeptide repeat-containing protein EMW1 [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_014086.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6W0N2, P42842
      UniProtKB/TrEMBL
      G2WLF6, N1NXU2
      Conserved Domains (2) summary
      COG0457
      Location:500 → 723
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:596 → 631
      TPR; TPR repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P42842.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools