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    glutamate-1-semialdehyde 2,1-aminomutase aminotransferase [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2539111, updated on 18-Sep-2024

    Summary

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    Official Full Name
    glutamate-1-semialdehyde 2,1-aminomutase aminotransferase
    Primary source
    PomBase:SPCC417.11c
    Locus tag
    SPOM_SPCC417.11C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    Location:
    chromosome: III
    Exon count:
    1
    Sequence:
    Chromosome: III; NC_003421.2 (1697661..1699520, complement)

    Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene transcription factor Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene dipeptide transmembrane transporter Dal51 Neighboring gene ncRNA Neighboring gene carboxylesterase, type B family protein Neighboring gene tRNA-Asn

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003421.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
    2. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
    3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    4. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
    5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables glutamate-1-semialdehyde 2,1-aminomutase activity ISM
    Inferred from Sequence Model
    more info
    		  
    enables pyridoxal phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transaminase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in porphyrin-containing compound biosynthetic process ISM
    Inferred from Sequence Model
    more info
    		  
    Component Evidence Code Pubs
    is_active_in mitochondrion HDA PubMed 

    General protein information

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    Preferred Names
    glutamate-1-semialdehyde 2,1-aminomutase aminotransferase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003421.2 Reference assembly

      Range
      1697661..1699520 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001023278.3 → NP_588288.2  glutamate-1-semialdehyde 2,1-aminomutase aminotransferase [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_588288.2

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O94492
      Conserved Domains (2) summary
      COG0001
      Location:23 → 427
      HemL; Glutamate-1-semialdehyde aminotransferase [Coenzyme transport and metabolism]
      cl18945
      Location:28 → 427
      AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
    Nucleotide Protein
    Heading Accession and Version

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