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    trp4 phosphoribosylanthranilate transferase Trp4 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2540065, updated on 18-Sep-2024

    Summary

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    Official Symbol
    trp4
    Official Full Name
    phosphoribosylanthranilate transferase Trp4
    Primary source
    PomBase:SPBC16G5.08
    Locus tag
    SPOM_SPBC16G5.08
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See trp4 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_003423.3 (4226914..4228615)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene prohibitin Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene serine carboxypeptidase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic Mapping in SCHIZOSACCHAROMYCES POMBE by Mitotic and Meiotic Analysis and Induced Haploidization. Kohli J, et al. Genetics, 1977 Nov. PMID 17248775, Free PMC Article
    2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    3. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
    4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
    5. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables anthranilate phosphoribosyltransferase activity ISO
    Inferred from Sequence Orthology
    more info
    		  
    Process Evidence Code Pubs
    involved_in tryptophan biosynthetic process EXP
    Inferred from Experiment
    more info
    		 PubMed 
    involved_in tryptophan biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol HDA PubMed 
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    phosphoribosylanthranilate transferase Trp4

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      4226914..4228615
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001023777.3 → NP_596757.1  phosphoribosylanthranilate transferase Trp4 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_596757.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O60122
      Conserved Domains (3) summary
      COG0547
      Location:7 → 353
      TrpD; Anthranilate phosphoribosyltransferase [Amino acid transport and metabolism]
      pfam00591
      Location:86 → 341
      Glycos_transf_3; Glycosyl transferase family, a/b domain
      pfam02885
      Location:29 → 60
      Glycos_trans_3N; Glycosyl transferase family, helical bundle domain
    Nucleotide Protein
    Heading Accession and Version

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