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    gem1 ERMES complex GTPase subunit Gem1 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2538910, updated on 18-Sep-2024

    Summary

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    Official Symbol
    gem1
    Official Full Name
    ERMES complex GTPase subunit Gem1
    Primary source
    PomBase:SPCC320.04c
    Locus tag
    SPOM_SPCC320.04C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See gem1 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    13
    Sequence:
    Chromosome: III; NC_003421.2 (163023..165664)

    Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene RNA-binding protein Mde7 Neighboring gene sulphate transporter Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene transcription factor Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003421.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
    2. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
    3. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
    4. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article
    5. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe. The cytochrome b gene has an intron closely related to the first two introns in the Saccharomyces cerevisiae cox1 gene. Lang BF, et al. J Mol Biol, 1985 Aug 5. PMID 4046021

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables GTP binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables GTPase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables calcium ion binding ISM
    Inferred from Sequence Model
    more info
    		  
    Process Evidence Code Pubs
    involved_in mitochondrion organization IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in mitochondrion-endoplasmic reticulum membrane tethering IC
    Inferred by Curator
    more info
    		  
    Component Evidence Code Pubs
    part_of ERMES complex ISO
    Inferred from Sequence Orthology
    more info
    		  
    is_active_in mitochondrial outer membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    ERMES complex GTPase subunit Gem1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003421.2 Reference assembly

      Range
      163023..165664
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001022720.3 → NP_587725.1  ERMES complex GTPase subunit Gem1 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_587725.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O59781
      Conserved Domains (6) summary
      cd01892
      Location:418 → 595
      Miro2; Mitochondrial Rho family 2 (Miro2), C-terminal
      cd01893
      Location:2 → 169
      Miro1; Mitochondrial Rho family 1 (Miro1), N-terminal
      COG1100
      Location:1 → 186
      Gem1; GTPase SAR1 family domain [General function prediction only]
      pfam08355
      Location:343 → 407
      EF_assoc_1; EF hand associated
      pfam08356
      Location:221 → 302
      EF_assoc_2; EF hand associated
      pfam13202
      Location:309 → 332
      EF-hand_5; EF hand
    Nucleotide Protein
    Heading Accession and Version

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