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    pub3 HECT-type ubiquitin-protein ligase Pub3 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2539956, updated on 18-Sep-2024

    Summary

    Official Symbol
    pub3
    Official Full Name
    HECT-type ubiquitin-protein ligase Pub3
    Primary source
    PomBase:SPBC16E9.11c
    Locus tag
    SPOM_SPBC16E9.11C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

    See pub3 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    2
    Sequence:
    Chromosome: II; NC_003423.3 (1935530..1938570, complement)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene AAA family ATPase Rix7 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene poly(A)-binding protein Pab2

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables phospholipid binding ISM
    Inferred from Sequence Model
    more info
     
    enables ubiquitin protein ligase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in ubiquitin-dependent protein catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    HECT-type ubiquitin-protein ligase Pub3

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      1935530..1938570 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001021694.3NP_595793.1  HECT-type ubiquitin-protein ligase Pub3 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_595793.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O14326, P79055
      Conserved Domains (5) summary
      cd08382
      Location:7130
      C2_Smurf-like; C2 domain present in Smad ubiquitination-related factor (Smurf)-like proteins
      smart00456
      Location:365397
      WW; Domain with 2 conserved Trp (W) residues
      COG5021
      Location:4786
      HUL4; Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]
      cd00078
      Location:434784
      HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
      pfam00397
      Location:308337
      WW; WW domain