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    sst6 ESCRT I complex subunit Vps23 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 3361461, updated on 18-Sep-2024

    Summary

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    Official Symbol
    sst6
    Official Full Name
    ESCRT I complex subunit Vps23
    Primary source
    PomBase:SPAC11H11.01
    Locus tag
    SPOM_SPAC11H11.01
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    cps23
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    Genomic context

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    See sst6 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    2
    Sequence:
    Chromosome: I; NC_003424.3 (4775689..4777440)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene adenylyl-sulfate kinase Neighboring gene ncRNA Neighboring gene protein mug162 Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Vesicle-mediated protein transport pathways to the vacuole in Schizosaccharomyces pombe. Takegawa K, et al. Cell Struct Funct, 2003 Oct. PMID 14745133
    2. Isolation of suppressor mutants of phosphatidylinositol 3-phosphate 5-kinase deficient cells in Schizosaccharomyces pombe. Onishi M, et al. Biosci Biotechnol Biochem, 2003 Aug. PMID 12951513
    3. ESCRTs Cooperate with a Selective Autophagy Receptor to Mediate Vacuolar Targeting of Soluble Cargos. Liu XM, et al. Mol Cell, 2015 Sep 17. PMID 26365378
    4. A complex network of interactions between mitotic kinases, phosphatases and ESCRT proteins regulates septation and membrane trafficking in S. pombe. Bhutta MS, et al. PLoS One, 2014. PMID 25356547, Free PMC Article
    5. Essential roles of class E Vps proteins for sorting into multivesicular bodies in Schizosaccharomyces pombe. Iwaki T, et al. Microbiology (Reading), 2007 Aug. PMID 17660439, Free PMC Article

    See all (17) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in cytoplasm to vacuole targeting by the NVT pathway IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in endocytosis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in late endosome to vacuole transport IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ESCRT I complex ISO
    Inferred from Sequence Orthology
    more info
    		 PubMed 
    is_active_in late endosome membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in nuclear envelope HDA PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    ESCRT I complex subunit Vps23

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      4775689..4777440
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001020147.3 → NP_001018287.1  ESCRT I complex subunit Vps23 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_001018287.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q7Z992
      Conserved Domains (1) summary
      pfam09454
      Location:422 → 479
      Vps23_core; Vps23 core domain
    Nucleotide Protein
    Heading Accession and Version

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