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    uncharacterized protein [ Saccharomyces cerevisiae S288C ]

    Gene ID: 852958, updated on 9-Dec-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    SGD:S000003299
    Locus tag
    YGR067C
    See related
    AllianceGenome:SGD:S000003299; FungiDB:YGR067C; VEuPathDB:YGR067C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Enables sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in chromatin. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    Location:
    chromosome: VII
    Exon count:
    1
    Sequence:
    Chromosome: VII; NC_001139.9 (622372..624786, complement)

    Chromosome VII - NC_001139.9Genomic Context describing neighboring genes Neighboring gene Vht1p Neighboring gene Gid10p Neighboring gene Art5p Neighboring gene Rho family guanine nucleotide exchange factor ROM1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001139.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Adaptive laboratory evolution of native methanol assimilation in Saccharomyces cerevisiae. Espinosa MI, et al. Nat Commun, 2020 Nov 4. PMID 33149159, Free PMC Article
    2. Diversification of transcription factor paralogs via noncanonical modularity in C2H2 zinc finger DNA binding. Siggers T, et al. Mol Cell, 2014 Aug 21. PMID 25042805, Free PMC Article
    3. Massively parallel measurements of molecular interaction kinetics on a microfluidic platform. Geertz M, et al. Proc Natl Acad Sci U S A, 2012 Oct 9. PMID 23012409, Free PMC Article
    4. High-resolution DNA-binding specificity analysis of yeast transcription factors. Zhu C, et al. Genome Res, 2009 Apr. PMID 19158363, Free PMC Article
    5. Two-hybrid analysis of the Saccharomyces cerevisiae 26S proteasome. Cagney G, et al. Physiol Genomics, 2001 Oct 10. PMID 11595789

    See all (27) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables sequence-specific DNA binding HDA PubMed 
    enables zinc ion binding RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  
    located_in chromatin IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_011581.4
    • hypothetical protein; contains a zinc finger motif similar to that of Adr1p

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001139.9 Reference assembly

      Range
      622372..624786 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001181196.4 → NP_011581.4  TPA: uncharacterized protein YGR067C [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_011581.4

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VUK1, P53243
      UniProtKB/TrEMBL
      A6ZV51, C8Z8W1, N1P9V5
      Conserved Domains (2) summary
      sd00017
      Location:10 → 30
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:36 → 57
      zf-C2H2; Zinc finger, C2H2 type
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P53243.2

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