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    trm61 tRNA (m1A) methyltransferase complex catalytic subunit Trm61 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2542192, updated on 18-Sep-2024

    Summary

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    Official Symbol
    trm61
    Official Full Name
    tRNA (m1A) methyltransferase complex catalytic subunit Trm61
    Primary source
    PomBase:SPAC9G1.12
    Locus tag
    SPOM_SPAC9G1.12
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    cpd1
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    Genomic context

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    See trm61 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (1993657..1996196)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene PAK-like GC kinase Sid1 Neighboring gene inositol polyphosphate phosphatase Neighboring gene ncRNA Neighboring gene mitotic septin Spn4 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Swr1 complex/NuA4 histone acetyltransferase complex subunit Swc4 Neighboring gene dynamin family protein Vps1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Initiator tRNA lacking 1-methyladenosine is targeted by the rapid tRNA decay pathway in evolutionarily distant yeast species. Tasak M, et al. PLoS Genet, 2022 Jul. PMID 35901126, Free PMC Article
    2. Large scale screening of genetic interaction with sgf73(+) in fission yeast. Guo Y, et al. Yi Chuan, 2014 Jul. PMID 25076038
    3. Transcription and chromatin-based surveillance mechanism controls suppression of cryptic antisense transcription. Heo DH, et al. Cell Rep, 2021 Sep 7. PMID 34496258, Free PMC Article
    4. A central role for TOR signalling in a yeast model for juvenile CLN3 disease. Bond ME, et al. Microb Cell, 2015 Nov 11. PMID 28357272, Free PMC Article
    5. Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast. Roguev A, et al. Science, 2008 Oct 17. PMID 18818364, Free PMC Article

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables tRNA (adenine(58)-N1)-methyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tRNA methylation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in tRNA methylation IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cytosol HDA PubMed 
    is_active_in nucleus HDA PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of tRNA (m1A) methyltransferase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    tRNA (m1A) methyltransferase complex catalytic subunit Trm61

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      1993657..1996196
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001019000.3 → NP_593567.1  tRNA (m1A) methyltransferase complex catalytic subunit Trm61 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_593567.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O14307
      Conserved Domains (2) summary
      COG2519
      Location:9 → 274
      Gcd14; tRNA A58 N-methylase Trm61 [Translation, ribosomal structure and biogenesis]
      pfam08704
      Location:64 → 350
      GCD14; tRNA methyltransferase complex GCD14 subunit
    Nucleotide Protein
    Heading Accession and Version

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