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    Rem1 rad and gem related GTP binding protein 1 [ Mus musculus (house mouse) ]

    Gene ID: 19700, updated on 27-Nov-2024

    Summary

    Official Symbol
    Rem1provided by MGI
    Official Full Name
    rad and gem related GTP binding protein 1provided by MGI
    Primary source
    MGI:MGI:1097696
    See related
    Ensembl:ENSMUSG00000000359 AllianceGenome:MGI:1097696
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Ras; Rem; E030011C07Rik
    Summary
    Enables transmembrane transporter binding activity. Acts upstream of or within negative regulation of calcium ion transmembrane transport via high voltage-gated calcium channel and regulation of skeletal muscle contraction by calcium ion signaling. Located in I band and T-tubule. Is expressed in alimentary system and urinary system. Orthologous to human REM1 (RRAD and GEM like GTPase 1). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Broad expression in genital fat pad adult (RPKM 15.2), ovary adult (RPKM 10.6) and 15 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Rem1 in Genome Data Viewer
    Location:
    2 H1; 2 75.41 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (152468928..152477111)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (152627008..152635191)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene defensin beta 36 Neighboring gene predicted gene, 31618 Neighboring gene defensin beta 25 Neighboring gene predicted gene, 31791 Neighboring gene STARR-seq mESC enhancer starr_06065 Neighboring gene RIKEN cDNA 1700030C14 gene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (2)  1 citation

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables GTP binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables calcium channel regulator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables transmembrane transporter binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in I band IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in T-tubule IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    GTP-binding protein REM 1
    Names
    RAS-like GTP binding protein Rem
    rad and Gem-like GTP-binding protein 1
    NP_033073.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_009047.6NP_033073.1  GTP-binding protein REM 1

      See identical proteins and their annotated locations for NP_033073.1

      Status: VALIDATED

      Source sequence(s)
      AL845162
      Consensus CDS
      CCDS16895.1
      UniProtKB/Swiss-Prot
      O35929
      UniProtKB/TrEMBL
      B2RWZ4
      Related
      ENSMUSP00000000369.4, ENSMUST00000000369.4
      Conserved Domains (2) summary
      smart00010
      Location:81245
      small_GTPase; Small GTPase of the Ras superfamily; ill-defined subfamily
      cd04148
      Location:81297
      RGK; Rem, Rem2, Rad, Gem/Kir (RGK) subfamily of Ras GTPases

    RNA

    1. NR_197785.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL845162

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      152468928..152477111
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)