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    Sfp38D Seminal fluid protein 38D [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 8673971, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Sfp38Dprovided by FlyBase
    Official Full Name
    Seminal fluid protein 38Dprovided by FlyBase
    Primary source
    FLYBASE:FBgn0261058
    Locus tag
    Dmel_CG42606
    See related
    AllianceGenome:FB:FBgn0261058
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG42606; Dmel\CG42606
    Summary
    Involved in sexual reproduction. Located in extracellular space. Is expressed in adult head. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Sfp38D in Genome Data Viewer
    Location:
    38D1-38D2; 2-54 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (20640917..20642216)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (20640917..20642216)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene (6-4)-photolyase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Divergent allocation of sperm and the seminal proteome along a competition gradient in Drosophila melanogaster. Hopkins BR, et al. Proc Natl Acad Sci U S A, 2019 Sep 3. PMID 31431535, Free PMC Article
    2. Seminal fluid gene expression and reproductive fitness in Drosophila melanogaster. Patlar B, et al. BMC Ecol Evol, 2022 Feb 23. PMID 35196983, Free PMC Article
    3. Proteomic discovery of previously unannotated, rapidly evolving seminal fluid genes in Drosophila. Findlay GD, et al. Genome Res, 2009 May. PMID 19411605, Free PMC Article
    4. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article
    5. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article

    See all (19) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in sexual reproduction HEP PubMed 
    Component Evidence Code Pubs
    located_in extracellular space HDA PubMed 

    General protein information

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    Preferred Names
    seminal fluid protein 38D
    Names
    CG42606-PA
    CG42606-PB
    Sfp38D-PA
    Sfp38D-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      20640917..20642216
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001273702.1 → NP_001260631.1  seminal fluid protein 38D, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260631.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      C0PUZ2, C4NAP3

    2. NM_001169552.1 → NP_001163023.1  seminal fluid protein 38D, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001163023.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      C0PUZ2, C4NAP3
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    C4NAP3 C4NAP3

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