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    NimB3 Nimrod B3 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 3885611, updated on 9-Dec-2024

    Summary

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    Official Symbol
    NimB3provided by FlyBase
    Official Full Name
    Nimrod B3provided by FlyBase
    Primary source
    FLYBASE:FBgn0054003
    Locus tag
    Dmel_CG34003
    See related
    AllianceGenome:FB:FBgn0054003
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BP1035; CG16882; CG34003; Dmel\CG34003; nimB3
    Summary
    Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See NimB3 in Genome Data Viewer
    Location:
    34E5-34E5; 2-50 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (13967464..13967985, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (13967464..13967985, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Nimrod A Neighboring gene Nimrod B1 Neighboring gene Nimrod B2 Neighboring gene Nimrod B4 Neighboring gene Nimrod B5 Neighboring gene Hemese

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and repeats in the Nimrod superfamily. Somogyi K, et al. Mol Biol Evol, 2008 Nov. PMID 18703524
    2. A secreted factor NimrodB4 promotes the elimination of apoptotic corpses by phagocytes in Drosophila. Petrignani B, et al. EMBO Rep, 2021 Sep 6. PMID 34370384, Free PMC Article
    3. Cross-phenotype association tests uncover genes mediating nutrient response in Drosophila. Nelson CS, et al. BMC Genomics, 2016 Nov 4. PMID 27809764, Free PMC Article
    4. Nimrod, a putative phagocytosis receptor with EGF repeats in Drosophila plasmatocytes. Kurucz E, et al. Curr Biol, 2007 Apr 3. PMID 17363253
    5. The adipokine NimrodB5 regulates peripheral hematopoiesis in Drosophila. Ramond E, et al. FEBS J, 2020 Aug. PMID 32009293

    See all (32) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nimrod B3
    Names
    CG34003-PA
    NimB3-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      13967464..13967985 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001038816.3 → NP_001033905.1  nimrod B3 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001033905.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B3DNK6, Q2PDU0
      Conserved Domains (1) summary
      PLN03223
      Location:49 → 106
      PLN03223; Polycystin cation channel protein; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q2PDU0 Q2PDU0

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