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    RpL7-like Ribosomal protein L7-like [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34625, updated on 9-Dec-2024

    Summary

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    Official Symbol
    RpL7-likeprovided by FlyBase
    Official Full Name
    Ribosomal protein L7-likeprovided by FlyBase
    Primary source
    FLYBASE:FBgn0032404
    Locus tag
    Dmel_CG5317
    See related
    AllianceGenome:FB:FBgn0032404
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG5317; Dmel\CG5317; Rp7-like
    Summary
    Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Predicted to be part of cytosolic large ribosomal subunit. Is expressed in adult head and organism. Orthologous to human RPL7L1 (ribosomal protein L7 like 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See RpL7-like in Genome Data Viewer
    Location:
    33C1-33C1; 2-46 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (12056326..12058251)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (12056326..12058251)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Promyelocytic leukemia zinc finger Neighboring gene Phosphatidylinositol-specific phospholipase C X domain containing Neighboring gene Juvenile hormone Inducible-21 Neighboring gene uncharacterized protein Neighboring gene Rab3 GTPase activating protein Neighboring gene firelighter

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Amino Acid Transporter JhI-21 Coevolves with Glutamate Receptors, Impacts NMJ Physiology, and Influences Locomotor Activity in Drosophila Larvae. Ziegler AB, et al. Sci Rep, 2016 Jan 25. PMID 26805723, Free PMC Article
    2. Relating past and present diet to phenotypic and transcriptomic variation in the fruit fly. May CM, et al. BMC Genomics, 2017 Aug 22. PMID 28830340, Free PMC Article
    3. Ribosome heterogeneity in Drosophila melanogaster gonads through paralog-switching. Hopes T, et al. Nucleic Acids Res, 2022 Feb 28. PMID 34283226, Free PMC Article
    4. A targeted gain-of-function screen identifies genes affecting salivary gland morphogenesis/tubulogenesis in Drosophila. Maybeck V, et al. Genetics, 2009 Feb. PMID 19064711, Free PMC Article
    5. Ribosomal proteins: mutant phenotypes by the numbers and associated gene expression changes. Polymenis M. Open Biol, 2020 Aug. PMID 32810425, Free PMC Article

    See all (36) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables RNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of ribosome TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation TAS
    Traceable Author Statement
    more info
    		 PubMed 
    involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of cytosolic large ribosomal subunit TAS
    Traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ribosomal protein L7-like
    Names
    CG5317-PA
    CG5317-PB
    CG5317-PC
    RpL7-like-PA
    RpL7-like-PB
    RpL7-like-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      12056326..12058251
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001298936.1 → NP_001285865.1  ribosomal protein L7-like, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285865.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SYU2, Q9VKC1
      Conserved Domains (2) summary
      cd01657
      Location:97 → 257
      Ribosomal_L7_archeal_euk; Ribosomal protein L7, which is found in archaea and eukaryotes but not in prokaryotes, binds domain II of the 23S rRNA as well as the 5S rRNA and is one of five ribosomal proteins that mediate the interactions 5S rRNA makes with the ribosome. The ...
      TIGR01310
      Location:18 → 257
      uL30_euk; 60S ribosomal protein uL30, eukaryotic form

    2. NM_001103681.2 → NP_001097151.1  ribosomal protein L7-like, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001097151.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SYU2, Q9VKC1
      Conserved Domains (2) summary
      cd01657
      Location:97 → 257
      Ribosomal_L7_archeal_euk; Ribosomal protein L7, which is found in archaea and eukaryotes but not in prokaryotes, binds domain II of the 23S rRNA as well as the 5S rRNA and is one of five ribosomal proteins that mediate the interactions 5S rRNA makes with the ribosome. The ...
      TIGR01310
      Location:18 → 257
      uL30_euk; 60S ribosomal protein uL30, eukaryotic form

    3. NM_135699.3 → NP_609543.2  ribosomal protein L7-like, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609543.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SYU2, Q9VKC1
      Related
      FBpp0079880
      Conserved Domains (2) summary
      cd01657
      Location:97 → 257
      Ribosomal_L7_archeal_euk; Ribosomal protein L7, which is found in archaea and eukaryotes but not in prokaryotes, binds domain II of the 23S rRNA as well as the 5S rRNA and is one of five ribosomal proteins that mediate the interactions 5S rRNA makes with the ribosome. The ...
      TIGR01310
      Location:18 → 257
      uL30_euk; 60S ribosomal protein uL30, eukaryotic form
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8SYU2 Q8SYU2
    Q9VKC1 Q9VKC1

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