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    Rsl24d1 ribosomal L24 domain containing 1 [ Mus musculus (house mouse) ]

    Gene ID: 225215, updated on 9-Dec-2024

    Summary

    Official Symbol
    Rsl24d1provided by MGI
    Official Full Name
    ribosomal L24 domain containing 1provided by MGI
    Primary source
    MGI:MGI:2681840
    See related
    Ensembl:ENSMUSG00000032215 AllianceGenome:MGI:2681840
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2410159K22Rik
    Summary
    Predicted to be a structural constituent of ribosome. Predicted to be involved in ribosomal large subunit biogenesis. Predicted to be located in nucleoplasm. Predicted to be active in nucleolus. Orthologous to human RSL24D1 (ribosomal L24 domain containing 1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Ubiquitous expression in CNS E11.5 (RPKM 36.0), CNS E18 (RPKM 21.4) and 25 other tissues See more
    Orthologs
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    Genomic context

    See Rsl24d1 in Genome Data Viewer
    Location:
    9 D; 9 40.1 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (73020751..73030615)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (73113469..73123333)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene RAB27A, member RAS oncogene family Neighboring gene STARR-seq mESC enhancer starr_24625 Neighboring gene STARR-seq mESC enhancer starr_24627 Neighboring gene STARR-seq mESC enhancer starr_24629 Neighboring gene STARR-seq mESC enhancer starr_24630 Neighboring gene STARR-positive B cell enhancer ABC_E5086 Neighboring gene KH domain containing 3, subcortical maternal complex member Neighboring gene STARR-seq mESC enhancer starr_24631 Neighboring gene ribosomal protein L36 pseudogene Neighboring gene predicted gene 27211

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Clone Names

    • MGC6735

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in ribosomal large subunit biogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in ribosome biogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in nucleolus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleolus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    probable ribosome biogenesis protein RLP24
    Names
    60S ribosomal protein L30 isolog
    ribosomal L24 domain-containing protein 1
    NP_941011.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_198609.2NP_941011.1  probable ribosome biogenesis protein RLP24

      See identical proteins and their annotated locations for NP_941011.1

      Status: PROVISIONAL

      Source sequence(s)
      AC157513
      Consensus CDS
      CCDS40688.1
      UniProtKB/Swiss-Prot
      Q99L28
      UniProtKB/TrEMBL
      E9PY85, Q5EBK7
      Related
      ENSMUSP00000034738.8, ENSMUST00000034738.14
      Conserved Domains (1) summary
      pfam01246
      Location:266
      Ribosomal_L24e; Ribosomal protein L24e

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      73020751..73030615
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)