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    Pttg1ip2 PTTG1IP family member 2 [ Mus musculus (house mouse) ]

    Gene ID: 381716, updated on 27-Nov-2024

    Summary

    Official Symbol
    Pttg1ip2provided by MGI
    Official Full Name
    PTTG1IP family member 2provided by MGI
    Primary source
    MGI:MGI:2686532
    See related
    Ensembl:ENSMUSG00000079666 AllianceGenome:MGI:2686532
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm1686; 1700015F17Rik
    Summary
    Predicted to be involved in protein import into nucleus. Predicted to be located in membrane. Predicted to be active in cytoplasm and nucleus. Orthologous to human PTTG1IP2 (PTTG1IP family member 2). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Restricted expression toward testis adult (RPKM 84.4) See more
    Orthologs
    NEW
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    Genomic context

    See Pttg1ip2 in Genome Data Viewer
    Location:
    5 A1; 5 2.89 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (5487827..5529143, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (5437827..5479143, complement)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene cyclin dependent kinase 14 Neighboring gene predicted gene, 54300 Neighboring gene STARR-seq mESC enhancer starr_12339 Neighboring gene STARR-seq mESC enhancer starr_12340 Neighboring gene STARR-seq mESC enhancer starr_12341 Neighboring gene predicted gene, 30151 Neighboring gene STARR-seq mESC enhancer starr_12342 Neighboring gene STARR-seq mESC enhancer starr_12343 Neighboring gene predicted gene, 30325 Neighboring gene claudin 12

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in protein import into nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001200025.1NP_001186954.1  PTTG1IP family member 2 precursor

      Status: VALIDATED

      Source sequence(s)
      AC068663, AK005993, AV044423
      Consensus CDS
      CCDS51410.1
      UniProtKB/Swiss-Prot
      D3YUK8
      Related
      ENSMUSP00000111107.2, ENSMUST00000115447.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      5487827..5529143 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006503594.4XP_006503657.1  PTTG1IP family member 2 isoform X1