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    Rwdd4a RWD domain containing 4A [ Mus musculus (house mouse) ]

    Gene ID: 192174, updated on 27-Nov-2024

    Summary

    Official Symbol
    Rwdd4aprovided by MGI
    Official Full Name
    RWD domain containing 4Aprovided by MGI
    Primary source
    MGI:MGI:2681000
    See related
    Ensembl:ENSMUSG00000031568 AllianceGenome:MGI:2681000
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Rwdd4; Gm1942
    Summary
    Is expressed in cerebral cortex ventricular layer and cortical plate. Orthologous to human RWDD4 (RWD domain containing 4). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in CNS E11.5 (RPKM 9.6), testis adult (RPKM 8.8) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Rwdd4a in Genome Data Viewer
    Location:
    8 B1.1; 8 26.86 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (47986680..48005872)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (47533645..47552837)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_21409 Neighboring gene predicted gene, 22857 Neighboring gene trafficking protein particle complex 11 Neighboring gene STARR-positive B cell enhancer ABC_E1754 Neighboring gene CapStarr-seq enhancer MGSCv37_chr8:48619048-48619157 Neighboring gene predicted gene, 39172 Neighboring gene spermatogenesis associated 2 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC27606

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    RWD domain-containing protein 4
    Names
    RWD domain-containing protein 4A

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_203507.3NP_987103.1  RWD domain-containing protein 4

      See identical proteins and their annotated locations for NP_987103.1

      Status: VALIDATED

      Source sequence(s)
      BB610203, BC016198, CJ227983
      Consensus CDS
      CCDS22297.1
      UniProtKB/Swiss-Prot
      Q9CPR1
      Related
      ENSMUSP00000033973.8, ENSMUST00000033973.14
      Conserved Domains (1) summary
      pfam05773
      Location:5107
      RWD; RWD domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      47986680..48005872
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)