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    rbp4.S retinol binding protein 4 S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 380159, updated on 4-Jan-2025

    Summary

    Official Symbol
    rbp4.S
    Official Full Name
    retinol binding protein 4 S homeolog
    Primary source
    Xenbase:XB-GENE-17335507
    Locus tag
    XELAEV_18037044mg
    See related
    EnsemblRapid:ENSXLAG00005026111 AllianceGenome:Xenbase:XB-GENE-17335507
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    rbp4; srbp
    Summary
    Predicted to enable retinol binding activity and retinol transmembrane transporter activity. Predicted to be located in extracellular space. Human ortholog(s) of this gene implicated in coronary artery disease and type 2 diabetes mellitus. Orthologous to human RBP4 (retinol binding protein 4). [provided by Alliance of Genome Resources, Jan 2025]
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    Genomic context

    See rbp4.S in Genome Data Viewer
    Location:
    chromosome: 7S
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7S NC_054384.1 (25681781..25691221)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7S NC_030737.1 (25152267..25161730)

    Chromosome 7S - NC_054384.1Genomic Context describing neighboring genes Neighboring gene leucine-rich, glioma inactivated 1 S homeolog Neighboring gene phosphodiesterase 6C S homeolog Neighboring gene free fatty acid receptor 4 S homeolog Neighboring gene protocadherin-8-like S homeolog Neighboring gene ectonucleoside triphosphate diphosphohydrolase 1 S homeolog

    Genomic regions, transcripts, and products

    General gene information

    Clone Names

    • MGC54038

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables retinoid binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables retinol binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables retinol transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    retinol-binding protein 4, plasma
    Names
    retinol binding protein 4, plasma
    serum retinol binding protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001086998.1NP_001080467.1  retinol-binding protein 4, plasma precursor

      See identical proteins and their annotated locations for NP_001080467.1

      Status: PROVISIONAL

      Source sequence(s)
      BC044674
      UniProtKB/Swiss-Prot
      P06172
      UniProtKB/TrEMBL
      A0A974CBD7, Q7ZXN8
      Related
      ENSXLAP00005077641.1, ENSXLAT00005079232.1
      Conserved Domains (1) summary
      pfam00061
      Location:41197
      Lipocalin; Lipocalin / cytosolic fatty-acid binding protein family

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054384.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      25681781..25691221
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)