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    Gm11837 predicted gene 11837 [ Mus musculus (house mouse) ]

    Gene ID: 100038514, updated on 9-Dec-2024

    Summary

    Official Symbol
    Gm11837provided by MGI
    Official Full Name
    predicted gene 11837provided by MGI
    Primary source
    MGI:MGI:3702175
    See related
    Ensembl:ENSMUSG00000086587 AllianceGenome:MGI:3702175
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Is expressed in several structures, including heart; intestine; liver; lung; and metanephros. Orthologous to human C8orf88 (chromosome 8 open reading frame 88). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in testis adult (RPKM 75.4), frontal lobe adult (RPKM 5.2) and 2 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Gm11837 in Genome Data Viewer
    Location:
    4 A2; 4 6.44 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (14929908..14953030)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (14929828..14953031)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E6153 Neighboring gene OTU domain containing 6B Neighboring gene phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 Neighboring gene STARR-seq mESC enhancer starr_09640 Neighboring gene N-terminal EF-hand calcium binding protein 1 Neighboring gene predicted gene 11844 Neighboring gene STARR-seq mESC enhancer starr_09641 Neighboring gene predicted gene, 36801

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein C8orf88 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001243100.1NP_001230029.1  uncharacterized protein C8orf88 homolog

      See identical proteins and their annotated locations for NP_001230029.1

      Status: VALIDATED

      Source sequence(s)
      AL831792
      UniProtKB/TrEMBL
      A0A9L6KDP1
      Related
      ENSMUSP00000159571.1, ENSMUST00000136992.8
    2. NM_001356579.1NP_001343508.1  uncharacterized protein C8orf88 homolog

      Status: VALIDATED

      Source sequence(s)
      AV044409, CD363818, CJ189634
      UniProtKB/TrEMBL
      A0A9L6KDP1
      Related
      ENSMUSP00000159570.1, ENSMUST00000137532.9

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      14929908..14953030
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)