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    Slco2a1 solute carrier organic anion transporter family, member 2a1 [ Mus musculus (house mouse) ]

    Gene ID: 24059, updated on 9-Dec-2024

    Summary

    Official Symbol
    Slco2a1provided by MGI
    Official Full Name
    solute carrier organic anion transporter family, member 2a1provided by MGI
    Primary source
    MGI:MGI:1346021
    See related
    Ensembl:ENSMUSG00000032548 AllianceGenome:MGI:1346021
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Pgt; PHOAR2; OATP2A1; Slc21a2; 2310021C19Rik
    Summary
    Enables prostaglandin transmembrane transporter activity. Acts upstream of or within prostaglandin transport. Predicted to be located in basal plasma membrane. Predicted to be active in basolateral plasma membrane. Is expressed in several structures, including ganglia; nose; renal cortex; respiratory system; and skin. Human ortholog(s) of this gene implicated in primary hypertrophic osteoarthropathy. Orthologous to human SLCO2A1 (solute carrier organic anion transporter family member 2A1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in lung adult (RPKM 114.3), spleen adult (RPKM 22.6) and 12 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Slco2a1 in Genome Data Viewer
    Location:
    9 F1; 9 54.72 cM
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (102885686..102973201)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (103007061..103096002)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene receptor-like tyrosine kinase Neighboring gene STARR-positive B cell enhancer ABC_E10580 Neighboring gene STARR-seq mESC enhancer starr_25080 Neighboring gene predicted gene, 31434 Neighboring gene predicted gene, 22595 Neighboring gene STARR-seq mESC enhancer starr_25082 Neighboring gene STARR-positive B cell enhancer ABC_E8309 Neighboring gene predicted gene, 46128 Neighboring gene predicted gene, 51658 Neighboring gene RAB6B, member RAS oncogene family

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables prostaglandin transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables prostaglandin transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables sodium-independent organic anion transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in prostaglandin transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within prostaglandin transport IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in sodium-independent organic anion transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in basal plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in basal plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in basolateral plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in lysosome IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane IC
    Inferred by Curator
    more info
    PubMed 

    General protein information

    Preferred Names
    solute carrier organic anion transporter family member 2A1
    Names
    solute carrier family 21 (prostaglandin transporter), member 2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_033314.4NP_201571.2  solute carrier organic anion transporter family member 2A1

      See identical proteins and their annotated locations for NP_201571.2

      Status: VALIDATED

      Source sequence(s)
      AC156633, AK087350, AK166724
      Consensus CDS
      CCDS23448.1
      UniProtKB/Swiss-Prot
      Q9EPT5
      UniProtKB/TrEMBL
      Q3TED0
      Related
      ENSMUSP00000035148.7, ENSMUST00000035148.13
      Conserved Domains (3) summary
      cd06174
      Location:166425
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      cd01330
      Location:441494
      KAZAL_SLC21; The kazal-type serine protease inhibitor domain has been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The KAZAL_SLC21 domain is a ...
      TIGR00805
      Location:1629
      oat; sodium-independent organic anion transporter

    RNA

    1. NR_157194.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC156633, AC161262
      Related
      ENSMUST00000188664.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      102885686..102973201
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)