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    1700126G02Rik RIKEN cDNA 1700126G02 gene [ Mus musculus (house mouse) ]

    Gene ID: 76648, updated on 17-Aug-2024

    Summary

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    Official Symbol
    1700126G02Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 1700126G02 geneprovided by MGI
    Primary source
    MGI:MGI:1923898
    See related
    AllianceGenome:MGI:1923898
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See 1700126G02Rik in Genome Data Viewer
    Location:
    6; 6 G3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (143157114..143167156, complement)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 31108 Neighboring gene STARR-positive B cell enhancer ABC_E2808 Neighboring gene STARR-seq mESC enhancer starr_17731 Neighboring gene predicted gene, 38921 Neighboring gene STARR-positive B cell enhancer ABC_E2215 Neighboring gene STARR-positive B cell enhancer ABC_E2216 Neighboring gene ethanolamine kinase 1 Neighboring gene predicted gene, 57769 Neighboring gene RIKEN cDNA 4930407I02 gene Neighboring gene DNA segment, Chr 6, ERATO Doi 474, expressed Neighboring gene predicted gene, 52926

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000072.7 Chromosome 6 Reference GRCm39 C57BL/6J

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
    5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      143157114..143167156 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_004933756.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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