folic acid binding / transferase [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Full Name: folic acid binding / transferase
Primary source: TAIR:AT2G20830
Locus tag: AT2G20830
See related: Araport:AT2G20830
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: F5H14.20; F5H14_20
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Genomic context

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See in Genome Data Viewer

Location:: chromosome: 2

Exon count:: 3

Sequence:: Chromosome: 2; NC_003071.7 (8968195..8970739, complement)

Chromosome 2 - NC_003071.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

MASC_STS17361 (e-PCR)
- UniSTS:258951

At-10C-219 (e-PCR)
- UniSTS:229366

NM_001202635.1

Supported by ESTs:

NM_001335710.1

Supported by ESTs:

NM_127651.4

Supported by ESTs:

NM_201768.2

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables folic acid binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in tetrahydrofolate interconversion	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in chloroplast	ISM Inferred from Sequence Model more info

General protein information

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Preferred Names: folic acid binding / transferase

NP_001189564.1

transferases;folic acid binding; FUNCTIONS IN: folic acid binding, transferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Formiminotransferase, N-terminal subdomain (InterPro:IPR012886), Formiminotransferas, N- and C-terminal subdomains (InterPro:IPR022384).

NP_565488.1

transferases;folic acid binding; FUNCTIONS IN: folic acid binding, transferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Formiminotransferase, N-terminal subdomain (InterPro:IPR012886), Formiminotransferas, N- and C-terminal subdomains (InterPro:IPR022384); Has 654 Blast hits to 651 proteins in 216 species: Archae - 14; Bacteria - 317; Metazoa - 90; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink).

NP_973497.1

transferases;folic acid binding; FUNCTIONS IN: folic acid binding, transferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Formiminotransferase, N-terminal subdomain (InterPro:IPR012886), Essential protein Yae1, N-terminal (InterPro:IPR019191), Formiminotransferas, N- and C-terminal subdomains (InterPro:IPR022384); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003071.7 Reference assembly

Range

8968195..8970739 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001335708.1 → NP_001324836.1 folic acid binding / transferase [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/Swiss-Prot

Q9C5G9, Q9SKT4

UniProtKB/TrEMBL

A0A178VT01
NM_001335709.1 → NP_001324837.1 folic acid binding / transferase [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A178VT01, A0A1P8B1B4
NM_127651.4 → NP_565488.1 folic acid binding / transferase [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/Swiss-Prot

Q9C5G9, Q9SKT4

UniProtKB/TrEMBL

A0A178VT01

Conserved Domains (2) summary

TIGR02024
Location:9 → 291

FtcD; glutamate formiminotransferase

pfam07837
Location:9 → 194

FTCD_N; Formiminotransferase domain, N-terminal subdomain
NM_001202635.1 → NP_001189564.1 folic acid binding / transferase [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A178VT01, F4IFJ9

Conserved Domains (2) summary

TIGR02024
Location:53 → 335

FtcD; glutamate formiminotransferase

pfam07837
Location:53 → 238

FTCD_N; Formiminotransferase domain, N-terminal subdomain
NM_001335710.1 → NP_001324838.1 folic acid binding / transferase [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8B1B9
NM_201768.2 → NP_973497.1 folic acid binding / transferase [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A5S9X020, A0A654EUL8, F4IFK0

Conserved Domains (3) summary

TIGR02024
Location:143 → 425

FtcD; glutamate formiminotransferase

pfam07837
Location:143 → 328

FTCD_N; Formiminotransferase domain, N-terminal subdomain

pfam09811
Location:24 → 61

Yae1_N; Essential protein Yae1, N terminal