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    Pla2g10os phospholipase A2, group X, opposite strand [ Mus musculus (house mouse) ]

    Gene ID: 76684, updated on 22-Oct-2024

    Summary

    Official Symbol
    Pla2g10osprovided by MGI
    Official Full Name
    phospholipase A2, group X, opposite strandprovided by MGI
    Primary source
    MGI:MGI:1923934
    See related
    Ensembl:ENSMUSG00000086550 AllianceGenome:MGI:1923934
    Gene type
    ncRNA
    RefSeq status
    PREDICTED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1810007I06Rik
    Expression
    Biased expression in colon adult (RPKM 9.3), stomach adult (RPKM 8.9) and 4 other tissues See more
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    Genomic context

    See Pla2g10os in Genome Data Viewer
    Location:
    16 A1; 16 9.52 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (13547700..13557335)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (13729836..13739471)

    Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene poly(A)-specific ribonuclease (deadenylation nuclease) Neighboring gene non-histone chromosomal protein HMG-14 pseudogene Neighboring gene periphilin 1, pseudogene 1 Neighboring gene bifunctional apoptosis regulator Neighboring gene phospholipase A2, group X Neighboring gene STARR-seq mESC enhancer starr_40155 Neighboring gene RIKEN cDNA A930007A09 gene Neighboring gene STARR-seq mESC enhancer starr_40157 Neighboring gene STARR-seq mESC enhancer starr_40159 Neighboring gene elongin-B pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Other Names

    • Pla2g10 opposite strand transcript

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_040574.1 RNA Sequence

      Status: PREDICTED

      Source sequence(s)
      AK007362
      Related
      ENSMUST00000141172.4

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000082.7 Reference GRCm39 C57BL/6J

      Range
      13547700..13557335
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)