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    RMD1 Rmd1p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 851563, updated on 9-Dec-2024

    Summary

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    Official Symbol
    RMD1
    Official Full Name
    Rmd1p
    Primary source
    SGD:S000002159
    Locus tag
    YDL001W
    See related
    AllianceGenome:SGD:S000002159; FungiDB:YDL001W; VEuPathDB:YDL001W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Predicted to be involved in meiotic cell cycle and sporulation resulting in formation of a cellular spore. Located in fungal-type vacuole membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See RMD1 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    1
    Sequence:
    Chromosome: IV; NC_001136.10 (447984..449276)

    Chromosome IV - NC_001136.10Genomic Context describing neighboring genes Neighboring gene kleisin alpha Neighboring gene Nhp10p Neighboring gene alpha,alpha-trehalase NTH1 Neighboring gene Ran GTPase-binding protein YRB1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001136.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mapping the translation initiation landscape of an S. cerevisiae gene using fluorescent proteins. Ben-Yehezkel T, et al. Genomics, 2013 Oct. PMID 23726901
    2. Deciphering protein kinase specificity through large-scale analysis of yeast phosphorylation site motifs. Mok J, et al. Sci Signal, 2010 Feb 16. PMID 20159853, Free PMC Article
    3. Large-scale functional genomic analysis of sporulation and meiosis in Saccharomyces cerevisiae. Enyenihi AH, et al. Genetics, 2003 Jan. PMID 12586695, Free PMC Article
    4. Identification and characterization of Prp45p and Prp46p, essential pre-mRNA splicing factors. Albers M, et al. RNA, 2003 Jan. PMID 12554883, Free PMC Article
    5. Identification of mitogen-activated protein kinase signaling pathways that confer resistance to endoplasmic reticulum stress in Saccharomyces cerevisiae. Chen Y, et al. Mol Cancer Res, 2005 Dec. PMID 16380504

    See all (36) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    involved_in meiotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in sporulation resulting in formation of a cellular spore IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm HDA PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in fungal-type vacuole membrane HDA PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Rmd1p
    NP_010283.3
    • Cytoplasmic protein required for sporulation; targeted to vacuole via AP-3 pathway

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001136.10 Reference assembly

      Range
      447984..449276
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001180060.3 → NP_010283.3  TPA: Rmd1p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_010283.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VRY7, Q03441, Q05210
      UniProtKB/TrEMBL
      A6ZXW5, B3LGQ9, B5VFR0, C7GXZ1, G2WCF3, N1P699
      Conserved Domains (1) summary
      COG1723
      Location:68 → 429
      Rmd1; Uncharacterized protein, Rmd1/YagE family [Function unknown]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q03441.1

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