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    Rpl24 ribosomal protein L24 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 64307, updated on 27-Nov-2024

    Summary

    Official Symbol
    Rpl24provided by RGD
    Official Full Name
    ribosomal protein L24provided by RGD
    Primary source
    RGD:621191
    See related
    EnsemblRapid:ENSRNOG00000001611 AllianceGenome:RGD:621191
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    A structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Predicted to act upstream of or within several processes, including exit from mitosis; nervous system development; and ribosomal large subunit assembly. Located in cytosolic ribosome. Part of cytosolic large ribosomal subunit. Orthologous to human RPL24 (ribosomal protein L24). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Spleen (RPKM 4377.1), Thymus (RPKM 4040.1) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Rpl24 in Genome Data Viewer
    Location:
    11q12
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 11 NC_086029.1 (58122997..58128405, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 11 NC_051346.1 (44653937..44659346, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 11 NC_005110.4 (47116885..47122093, complement)

    Chromosome 11 - NC_086029.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain containing 11 Neighboring gene small nucleolar RNA SNORA29 Neighboring gene zinc finger and BTB domain containing 11, opposite strand 1 Neighboring gene uncharacterized LOC134481067 Neighboring gene centrosomal protein 97 Neighboring gene neurexophilin and PC-esterase domain family, member 3 Neighboring gene adaptor related protein complex 3 subunit sigma 1, pseudogene 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables mRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables structural constituent of ribosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
     
    enables structural constituent of ribosome ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    involved_in cytoplasmic translation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cytoplasmic translation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cytoplasmic translation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cytoplasmic translation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in exit from mitosis IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within exit from mitosis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in optic nerve development IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within optic nerve development ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in retina development in camera-type eye IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within retina development in camera-type eye ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in retinal ganglion cell axon guidance IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within retinal ganglion cell axon guidance ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in ribosomal large subunit assembly IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within ribosomal large subunit assembly ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within translation IC
    Inferred by Curator
    more info
    PubMed 
    acts_upstream_of_or_within translation ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    part_of cytosolic large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of cytosolic large ribosomal subunit IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of cytosolic large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
     
    part_of cytosolic large ribosomal subunit ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytosolic ribosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytosolic ribosome ISO
    Inferred from Sequence Orthology
    more info
     
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    located_in endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
     
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in synapse ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    large ribosomal subunit protein eL24
    Names
    60S ribosomal protein L24
    L30

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_022515.2NP_071960.1  large ribosomal subunit protein eL24

      See identical proteins and their annotated locations for NP_071960.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000011
      UniProtKB/Swiss-Prot
      P83732
      UniProtKB/TrEMBL
      A0A0H2UH99, A6IQQ7
      Related
      ENSRNOP00000002194.7, ENSRNOT00000002194.9
      Conserved Domains (1) summary
      pfam01246
      Location:264
      Ribosomal_L24e; Ribosomal protein L24e

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086029.1 Reference GRCr8

      Range
      58122997..58128405 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)